| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5148 |
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| Symbol | |
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| ID | 5153521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5380455 |
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| End bp | 5381585 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559923 |
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| Product | putative acyl-CoA dehydrogenase, pimD-like protein |
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| Protein accession | YP_001241050 |
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| Protein GI | 148256465 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.210774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0144786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC AATTCACCGA AGAACAAGAG CTGCTGCGCG CCAGCATCCA GCGGCTGCTG
CACGATCAGT ACGCCTTCGA CGCGCGCCGC AAGATCGTGG CAAGCGATGA AGGCTTCAGC
CGGAGGCATT GGACGGCACT CGCAGACCTC GGACTCTGCG CCGCGCCATT CGACGAGAGT
GTCGGCGGCC TGGGCGGCGG CGCGCTCGCC ACCATGATCG TGATGCAGGA GTTCGGCCGC
CATTTGGTGG TCGAGCCCTA TTTCGAAACG GTGGTGCTCG CCGGCGGCCT GATCGCCGCC
GTAGGCAGCG CCGCGCAGCG CGCCGCCTAC TTGCCGAAGA TCATGGACGG CAGCACGATC
TGGACCCTGG GCTGGGCCGA GCGGCCGTCG CGCTACGATT TCGACAAGGT CGAGACCACT
GCCCGGCGCG ATGGAGAGCA TTACGTTCTG AGCGGCAAGA AGGTCGCCGT GACAGCCGCG
CCCTGGGCCG ACAAGCTGAT CGTCTCGGCG CGGACCGTGG GTGACAGCGG CGACGGCACC
GGGCTCAGCC TATTCGTGGT CGACCGTCAT GCCGCTAATC TGCATCTGCA GAGCTTTCGG
ACCATCGACG GACGGCGCGC CGCCGAACTC GTGCTGATGG ATGTCAGGGT TCCGGCGGAC
GACAGGCTGG GCGCCGAAGG CGAGGGGACG GCCGCGCTCG AAGCCTGCCG CGACCGTGCG
ATCGCCGCCC AATGCGCCGA GGCCGTCGGG GCGATGACCG AGCTGAACGC CGCGACCTTG
GCGTACAGCA AGACCCGCAA GCAGTTCGGC GTGACGCTCG GAACGTTTCA GGTGCTGCAG
CACCGGATGG TGGACATGTT CATCGCGCTC GAGGAGTCGA TCTCGCTCAC CCAGCACCTG
AACCTCAGTC TTGCGTCGAA CGAACCGCAC CTCTCGCGGT TGGCGTCGGG AGCCAAGTCC
AAGGTCGGAA CAGCCGCGCG CTTCGTCGCC GATCAGTCGG TCCAGCTGCA TGGCGGCATG
GGCATGAGCG ATGAGCTCAA TGTGGGCCAT TACTTCAAGC GGATCAGCGC GATCAACATC
CAGTTCGGCG ATCCTGCATT TCATCTGATG CGTTACGCCC AGCAGAGCTG A
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| Protein sequence | MDIQFTEEQE LLRASIQRLL HDQYAFDARR KIVASDEGFS RRHWTALADL GLCAAPFDES
VGGLGGGALA TMIVMQEFGR HLVVEPYFET VVLAGGLIAA VGSAAQRAAY LPKIMDGSTI
WTLGWAERPS RYDFDKVETT ARRDGEHYVL SGKKVAVTAA PWADKLIVSA RTVGDSGDGT
GLSLFVVDRH AANLHLQSFR TIDGRRAAEL VLMDVRVPAD DRLGAEGEGT AALEACRDRA
IAAQCAEAVG AMTELNAATL AYSKTRKQFG VTLGTFQVLQ HRMVDMFIAL EESISLTQHL
NLSLASNEPH LSRLASGAKS KVGTAARFVA DQSVQLHGGM GMSDELNVGH YFKRISAINI
QFGDPAFHLM RYAQQS
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