Gene BBta_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5143 
Symbol 
ID5153365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5375875 
End bp5376477 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID640559918 
Producttranscriptional regulator 
Protein accessionYP_001241045 
Protein GI148256460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.269687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0526166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATTA CCGAGAGCCA GACGCTGAAG AACAGGCAGA AGGTAGTCGC GAAGGCGGCC 
CGGCTGTTTC GAGAGCGCGG TTTCGAAAAT ATTTCAGTGG GGGCGCTGAT GAAGGCCGCC
GGCTTCACCC ATGGCGGCTT CTACAATCAT TTCGAGTCCA AGAGCGCGCT GGCCGGCGAG
GCGCTCGCGC ATGCGTTCCA CGAGATGGAG CGGGTCCGCG AAACCATGCC GGGGCGCGAG
GCCTTTGTGA AATCCTATAT GTCGGACGCG GCCCGCGACG CGCCCGGAGC GACGTGTCCG
GCCGCCTCGC TGGCTGGCGA TATCGCGCGG CAGCCGGACG CCATCAAGGA GGTCTTTGCC
GAAGGCATCG AACGCATGAT CGACTGGATG CAGAACGCGT CGTCAGCGAC GCCCATGGCG
CGTGAGGAGG CGGTGGACCT GATCTGCCGC ATGGTCGGGG CGCTGATGCT GGCCCGCGCC
ATGCCGGCGT CGAGCGATCT CCGGCGCGAA CTGCTTGTGA CAGAGACGCA GCAATGTCTG
ATCGACCTGC CGAAATCTGC CGGCGAGCCG CGCCGTCGTC CCAAATCGCC GCGATCCGCA
TAA
 
Protein sequence
MRITESQTLK NRQKVVAKAA RLFRERGFEN ISVGALMKAA GFTHGGFYNH FESKSALAGE 
ALAHAFHEME RVRETMPGRE AFVKSYMSDA ARDAPGATCP AASLAGDIAR QPDAIKEVFA
EGIERMIDWM QNASSATPMA REEAVDLICR MVGALMLARA MPASSDLRRE LLVTETQQCL
IDLPKSAGEP RRRPKSPRSA