| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5138 |
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| Symbol | |
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| ID | 5153453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5369591 |
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| End bp | 5371078 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640559914 |
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| Product | putative periplasmic peptide-binding protein ABC transporter |
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| Protein accession | YP_001241041 |
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| Protein GI | 148256456 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0462348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAATC CCGGCGAGCC GAATGTCCTG ACCACCGGCG TGGGCCAGGC GGGAGCGGTC
CTCGCAGTGT CCTCGAAGAT CTTCGACGGG CTGCTCCGCT ACGGCGAGAA CTTCGCACTC
GAACCCGAAC TCGCGACCGC CTGGGTGACC AGCGCCGACG GCAAGGAAAT CCGCTTCACC
TTGCGGCCGA ACGTGCGTTG GCACGACGGC GCTCCGTTCA CGTCTGCCGA TGTGAAGTTC
AGTTTCGAGC AGGTGTGGAT GAAGGTCCAT CCGCGTGCAC GCGCGACCTT TGCCGCGGTC
GAAGCGGTCG AAACGCCCGA CCCGCTGACC GTGGTGTTCA AGCTCCGCAA TCCGTCCGGC
GTGATCCTCA GTGCGCTCAA CAGCACCGAG TCCACGGTGC TGCCGAAACA TCTCTACGAA
GGCACCGACA TCCTCACCAA TCCGTACAAC GTCAAACCGG TCGGCACCGG CCCGTTCCGG
TTCGTCGAAT GGGTGCGCGG CGAACGCATC GTGCTGGAGC GCAACCCCGA TTATTGGGAC
ACCGGCAAGC CGTATCTCGA TCGTGTCATC TATCGCATGA TTCCGGACGC GACCGCGCGC
TACGCCGCGT TCGAATCCGG GGCGGTGCAT CTCGGGGTCC ATTCGCCGAT CTCGATCAAC
GATCTGGCGC GGGCCGAGAA GAACCCGGCC CTGCGCGTCG AGTTTCGCGG CTATGAGTGG
CTGGGTTCGT CGATCGTCGG CGAGTTCAAC GTGCGCCGTC CGCCGTTCGA CGACGTCCGG
GTCCGCCGGG CTGTGGTACA CGCGATCGAT CTGCAGGCCT TCTCGCGCGT GACGATGCGT
GGCATCGGCA AGCCGGGTAC GTCGCCCGTG CTGTCGTCGC AGACCAAGTT CTTCGTCGAG
AGCGGCCTTG CGAGCTATCC GTTCGACCGC GCCAAGGCCG AGGCGCTGCT GGACGAAGCC
GGGTATCCGC GCAAGGCCGA CGGCAAGCGC CTGGAGATCA CGCTCGACTG GCTGCCGTTC
GGCGAAAGCT TCCAGCGCTT CGGCGAATTC CTGAAGCAGT CGCTGAAGGC GGTCGGCATC
GAAGCGACGC TGCGGAGCCA GGATCTGCCG CAGTTCTTCC GCAGGGTCTA TTCGCTCAAC
GATTTCGATT TCATCGTCAC GCACCATTCT GGTTTCGCGG ATCCGCAGAT TGGGCTCGAT
CGCGTGTTCT GGTCGAAGGC CATCCTGAAG GACGTGCCGT GGTCGAACGG ATCGGGTTAT
GCCAGCCCGG CCATGGATCG GCTGATCGAG GCCGCGCACA TCGCCGCGAC GGAAGACCAG
CGCGTCGCGC TCTACAAGCA GGTGCAGGCG CAGGCCCAGC TTGACGTTCC GCGGTTCACG
CTGGCGGAAA ACCGGCAGTA CACCATCGTG TCGGCCCGGG TCCGGGACCT CGATACCGGG
GTCATCGGCA TCTATGATTC GCTCAAGAAC ACGTGGCTGG CGCCATGA
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| Protein sequence | MSNPGEPNVL TTGVGQAGAV LAVSSKIFDG LLRYGENFAL EPELATAWVT SADGKEIRFT
LRPNVRWHDG APFTSADVKF SFEQVWMKVH PRARATFAAV EAVETPDPLT VVFKLRNPSG
VILSALNSTE STVLPKHLYE GTDILTNPYN VKPVGTGPFR FVEWVRGERI VLERNPDYWD
TGKPYLDRVI YRMIPDATAR YAAFESGAVH LGVHSPISIN DLARAEKNPA LRVEFRGYEW
LGSSIVGEFN VRRPPFDDVR VRRAVVHAID LQAFSRVTMR GIGKPGTSPV LSSQTKFFVE
SGLASYPFDR AKAEALLDEA GYPRKADGKR LEITLDWLPF GESFQRFGEF LKQSLKAVGI
EATLRSQDLP QFFRRVYSLN DFDFIVTHHS GFADPQIGLD RVFWSKAILK DVPWSNGSGY
ASPAMDRLIE AAHIAATEDQ RVALYKQVQA QAQLDVPRFT LAENRQYTIV SARVRDLDTG
VIGIYDSLKN TWLAP
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