| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5131 |
|---|
| Symbol | |
|---|
| ID | 5153675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5360850 |
|---|
| End bp | 5362748 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640559907 |
|---|
| Product | putative acyltransferase |
|---|
| Protein accession | YP_001241034 |
|---|
| Protein GI | 148256449 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0498038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0856851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAACGCA ATCATCGTGC TGACATCGAT GGCCTCCGGG CCATCGCCGT CATCATCGTC
ATTCTCTTCC ACCTGAGAAT TGCGGGCTTC GAGGCGGGCT TCGCCGGCGT CGACATCTTC
TTCGTCATCT CCGGCTATCT CATCACCGGC CAGATCCTGC GCGATCTCAG GGCCGGACGG
TTCGCGCTGT CGGAGTTCTA TCTGCGGCGC GCGCGGCGCA TCCTGCCGGC GCTGATCACG
ACGATTGCCG CGAGCTTTGC GGTCGGCTGG CTGTTCCTGT CGCCCGAAGC CCTGCGCCAG
CTGGCGAAGG AGGCGACGCA CGGGCTGCTG TCGATCGCCA ACGTGCAATA TTGGCGCGAG
GCGAGCGCCT ATTTCGCGCC GAATGCGGAC CAGCTGCCGC TGTTGCATCT GTGGTCGCTG
TCGCTGGAAG TGCAGTTCTA TGCGTTGGCG CCGCTGCTCC TGATGTGGAT CGGCCATGGC
CGGGCGGTGT TTCGCGCCAT CGCGGCCGTC GGATTGGCGT CCTTCGTCCT GGCGATCCTG
TACTTGCCTT ATGATTCCGA CGCCGTGTTC TTCCTGACGC CATTCCGGGT GTTCGAGTTC
GCGCTCGGGG CGCTCGCCAT TCCGCTGGAG GCGCGTCTCG CATCGGCGCC GCGGGCCCGC
GCCGTCGCGG CGGCCTGCGG CGATGTCGTC CTGCTCGGCA GCCTCGCGGT GATCGGGCGC
TATCAGGCCT ATGCAGGCGT GGCCGCGATC CTGCCGTGCC TCGCGGCCAT GATCATCATC
GCAGCCAACG CGCCGACATC GCTGATGATG GCTGGTCCGG TCCGTGCCAT CGGCGCGGCG
TCCTACTCGC TCTATCTCGT GCATTGGCCG GTGATCTTTT TCGCCGGCTT CATCTTCGGC
GACGCCGCGC AGACATTCGC GGGACTTGTC GCACAGCTTG CGCTGATGGC GGCACTGGCG
GCGCTCATGT TCGTCGCGGT CGAGCAGCCG ATGCGCCGGC TGCGCTGGCC GCGCTGGACG
CAGGTGGCCG GCTTCGCGTC CGTTCTGCTC GCCGTCACCG CGGTCACCCA TCTGACGTTC
CGCGCCCATG GCGTCGTCTC GCGGCTGCCG GCAGATCAGC TTGCGCTGTT CCAATTGCAG
GGCTTCGGTC TCAACAAATG CGGCCGCGCG GTCGATCGCA TCTGCGTATT TGGCGACCTC
GCGGGCACGC GCGGCGTCGA GCTGCTGGGC GATTCCTATG TGCAGCAATA TGTCGCCGCA
CTCGATACGA CCCTCAAGAC CCGCGGCATG ATCGGACATG TCTCGACGAT GAGCGGCTGT
CCGGTTCTGT CGGGTCTGAG CGCCGAAGGA GCGCGCGCAC GGGTCTGCGC GGAGCTGCGC
GACAGCGAAC TGCCGCGGGT CCGGCAATCG CAAGCCGATT ACGTCGTGAT CGGCCAAGCT
TGGCAGAACT ATCTGGATCT CGGTGACGGC CCAGCGGCCG AGGCCCGCAA CGCCGAGGTC
GCGGCCGATC TGGTCGAGAC GATCCGTCTG CTCGACCGGC CGGGCCGGCA TTTCCTGGTC
ATCGGCGGCC AGGTCAGGCC GGTGAATTGC GGCTTCGATC AGCTGCGCAT GCTGCCGGGA
CCGCGCTGGC ATGCGCCGGC CAAGCCGTGC GATCCCGTGC CGAAGGCCGA AGCCGTCGCC
GCCAATCGCA CCATCGATGC CGTGCTGTCG CAGGCGATCA GGCCATTGGC CAAGGTGGCG
CTGCTCAGGC CGTCCGAGGT TTATTGCGAC CGGGACTGTC CGGTCGTGCA GGACGGCGTG
TGGCTGTTTC AGGATGCCGG TCACTTCACC GTGGCAGGAG CGCAGCGCAT GGGCGAGCGC
GCCGCCCCGA TCTTTGCGCG GTTCCTGGCA GACGACTAG
|
|---|
| Protein sequence | MQRNHRADID GLRAIAVIIV ILFHLRIAGF EAGFAGVDIF FVISGYLITG QILRDLRAGR
FALSEFYLRR ARRILPALIT TIAASFAVGW LFLSPEALRQ LAKEATHGLL SIANVQYWRE
ASAYFAPNAD QLPLLHLWSL SLEVQFYALA PLLLMWIGHG RAVFRAIAAV GLASFVLAIL
YLPYDSDAVF FLTPFRVFEF ALGALAIPLE ARLASAPRAR AVAAACGDVV LLGSLAVIGR
YQAYAGVAAI LPCLAAMIII AANAPTSLMM AGPVRAIGAA SYSLYLVHWP VIFFAGFIFG
DAAQTFAGLV AQLALMAALA ALMFVAVEQP MRRLRWPRWT QVAGFASVLL AVTAVTHLTF
RAHGVVSRLP ADQLALFQLQ GFGLNKCGRA VDRICVFGDL AGTRGVELLG DSYVQQYVAA
LDTTLKTRGM IGHVSTMSGC PVLSGLSAEG ARARVCAELR DSELPRVRQS QADYVVIGQA
WQNYLDLGDG PAAEARNAEV AADLVETIRL LDRPGRHFLV IGGQVRPVNC GFDQLRMLPG
PRWHAPAKPC DPVPKAEAVA ANRTIDAVLS QAIRPLAKVA LLRPSEVYCD RDCPVVQDGV
WLFQDAGHFT VAGAQRMGER AAPIFARFLA DD
|
|---|
| |