| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5126 |
|---|
| Symbol | |
|---|
| ID | 5153157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5355048 |
|---|
| End bp | 5356007 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640559901 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001241029 |
|---|
| Protein GI | 148256444 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.255501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.155944 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG TCCTGCTCGA CCATCATCGT CTGCAATATC TCCATGAAGC GGTGCGGCTG
GGCTCGGTGC GCGCCGCAGC GGAAGCGCTC GACATCAACG CCTCGGTGGT CAGCCGACAG
ATCGCGCTGT TGGAGAAGGA GCTGGGGCTC AGCCTGATCG AGCGCCTCAG TCGCGGCATT
CGCGCCACCG AAGCCGGCGC GCTGCTGGTC GAGCGTTTCC GGAAATGGGA GGCCGACCAG
GCCGACACGG TTGCGAAGCT GCGCGAGCTG CAGGGGCTCA AACGCGGCCA TGTCGACATC
GTGCTCGGCG AAGGCTTCGT CAGCGACCTG ATGTCGGGCC CGCTCGGCCG CTTCTGGCTG
CGCCATCCGG ATCTGACCAT GGCGTTCGAT CTCGCCGGCA CCAACGAGGT CGTCAACGCC
GTGGCCGAGG ACCGCTATCA CATCGGCCTG GTGTTCAACC CGAGCGCCGA TCCTCGCATC
CGCGTGGCGA CCGCAAGCCG GCAGCCGCTG TGCGCCATCC TGCCGCCCGG TCACGCGCTG
GCCGGCCTCA ACCGTCCCTT GCGCCTGCAC GAGCTCGTCG ATCACCCGCT CGGCCTGATG
CATCCAAGCT ATGGCACGCG GCAGATCCTG GCCATGGCAG AGGCGGCGGA ACGGATCGCC
CTCGCACCCA AGCTCACCAC CAGCTCCATC AATGTGCTCC GCCATTTCGT CAAGAGCGGC
CTCGGCCTGA CGCTGCTGCC GGCGTTCTCG ATCGCCGCCG ATCTCGCCGA CGGCTCGCTT
GCAGCGATCC CGATCGACAA CCGCCTGCTG TCGTCGAGCG AAGCCTGCGT CATCACCCGC
CGCGGCCGCG AGCTGCCGCA TGCCGCGGGT CAGCTGCTGC GCTTCCTGAG CGGACAGATG
CGGGCCTTCC GGGCCGGCGA GCCGGCCGCC AAGATGAAGC CGCGCGCGAC CCGCCGCTGA
|
|---|
| Protein sequence | MSAVLLDHHR LQYLHEAVRL GSVRAAAEAL DINASVVSRQ IALLEKELGL SLIERLSRGI
RATEAGALLV ERFRKWEADQ ADTVAKLREL QGLKRGHVDI VLGEGFVSDL MSGPLGRFWL
RHPDLTMAFD LAGTNEVVNA VAEDRYHIGL VFNPSADPRI RVATASRQPL CAILPPGHAL
AGLNRPLRLH ELVDHPLGLM HPSYGTRQIL AMAEAAERIA LAPKLTTSSI NVLRHFVKSG
LGLTLLPAFS IAADLADGSL AAIPIDNRLL SSSEACVITR RGRELPHAAG QLLRFLSGQM
RAFRAGEPAA KMKPRATRR
|
|---|
| |