Gene BBta_5123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5123 
Symbol 
ID5153336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5351470 
End bp5352426 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID640559898 
ProductN-carbamoyl-D-amino acid hydrolase (D-N-alpha- carbamilase) 
Protein accessionYP_001241026 
Protein GI148256441 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.407731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCT TTGTCAACGT CGCCATCGGC CAGCTCGGCC CCATCGCCAG GAGCGAGCCG 
CGCCACGCGG TGGTCAGGCG GCTGACGGCG TTGATGCGCC AGGCGCACGC CAATGGCTGC
GACCTCATCG TCTATCCCGA GCTCGCGCTC ACGACCTTCT TCCCGCGCTG GTACATGGCC
GATCAGGCCG AGATCGACTC GTATTTCGAG CGCGAGATGC CGGGGCCGGA GACGCAGGCG
CTGTTCGCAC TCGCAAACGA GCTGCGCATC GGCTTTTGCT TAGGCTATGC CGAGCTCGCG
GTCGAGGACG GCGTCGTGCA TCGCTACAAC ACCGCGATTC TGGTCGACAA GTCCGGCCAG
ATCGTCGCGA AATACCGCAA GGTGCATCTG CCCGGGCATG CCGAGCACGA GCCGTGGCGC
AAGTTCCAGC ATCTCGAGAA GCGCTATTTC GAGCCCGGCA AGGCCTTCGG CGTTACCGAT
GCGTTCGGCG GCGTGATCGG CATGGCGATC TGCAACGACC GCCGCTGGCC CGAGACCTAT
CGCGTGATGG GGCTGCAGGG CGTCGAGATG GTGCTGATCG GCTACAACAC GCCGGTGCAC
AATCCGCCGG CGCCGGAGCA TGACGACCTC TCGCTGTTCC ACAATCGCCT CGTGATGCAG
TCCGGTGCCT ATCAGAACGG CACCTGGGTG ATCGGCGTCG CCAAGGGCGG CATCGAGGAA
GGCGTCGACC ACATCGCCGG CAGCTGCATC ATCGCACCCT CCGGCGAGAT CGTGGCCGCA
TGCGCCACCA AGGGCGACGA GATCGCGCTG GCGCGCTGCG ACCTCGATCT GTGCAACTCC
TATAAGCAGA CGATCTTCAA TTTCGACGTC CATCGCCAGC CGCAGGCCTA TCGCATGATC
GTCGAGCGCA GGGGCACGAC GCGGATGGCC GATGGCGCGC CGGTGCGGAA GCCGTGA
 
Protein sequence
MPRFVNVAIG QLGPIARSEP RHAVVRRLTA LMRQAHANGC DLIVYPELAL TTFFPRWYMA 
DQAEIDSYFE REMPGPETQA LFALANELRI GFCLGYAELA VEDGVVHRYN TAILVDKSGQ
IVAKYRKVHL PGHAEHEPWR KFQHLEKRYF EPGKAFGVTD AFGGVIGMAI CNDRRWPETY
RVMGLQGVEM VLIGYNTPVH NPPAPEHDDL SLFHNRLVMQ SGAYQNGTWV IGVAKGGIEE
GVDHIAGSCI IAPSGEIVAA CATKGDEIAL ARCDLDLCNS YKQTIFNFDV HRQPQAYRMI
VERRGTTRMA DGAPVRKP