| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5122 |
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| Symbol | |
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| ID | 5153335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5349628 |
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| End bp | 5351232 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559897 |
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| Product | putative ABC transporter periplasmic-binding protein |
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| Protein accession | YP_001241025 |
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| Protein GI | 148256440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.259122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCA GAACGGTATT GAAGGGGTTG GCGGGCGCGG GTGGCCTCGC TCTGACCGGC
GGCTTCGCGG CGCCGGCGAT CGCGCAAGGC GCTGCCGCTC GCACCCTGCG CTTTGTGCCG
CAGGCCAATC TCGCCAATTT CGATCCGATC TGGGGCACGC AATATGTCGT GCGCAACGCG
GCGGCGATGG TGTGGGACAC GCTGTATGGC ATCGACGACC AGTTCGTGCC GCAGCGCCAG
ATGGTGGAAT CGGAAGAAGT CTCCTCCGAC GGCCTGACCT GGACCTTCAA GCTGCGCCCG
GGGCTGAAAT TCCATGACGG CACGCCGGTG CTCGCCAAGG ACGTCGTGGC CAGCCTGACA
CGCTGGTCGG CGCGCGACCC GATGGGCCTG ATGCTCAAGG CGCTGCAGAA CGAGCTCACC
GCGGTCGACG ACAAGACCTT CAAATGGGTC CTGAAGCAGC CTTATCCGAA GATGCTGTTC
GCACTCGGCA AGGGCAATGC GCCCTGCGCC TTCATCATGC CCGAGCGCAT CGCGCAGACC
GATCCGTTCA AACAGATGAC CGAATATGTC GGCTCTGGCC CGTTCAAATT CGTCAAGGGC
GAATGGGTGC CGGGCGCCAA GGCCGTGTTC GAGAAGTTCA CCGACTACGT GCCGCGCCAG
GAGAAACCGG TATGGCTCGC CGGCGGCAAG CAGGTGCTGG TCGATCGCGT CGAATGGGTG
ATCATGCCGG ATCCGGCGAC CGCTGCTGCC GCGCTGCAGA ATGGTGAGGT CGATTGGTGG
GAGAACCCGA TCACCGATCT GGTGCCGGTC CTGAAGGGCA ACAAGAACAT CGGCGTCGAC
ATCGGCGATC CCCTGGGCAA TGTCGGCGCG TTCCGCATCA ATCATCTGCA TGCGCCGTTC
AACAATGTGA AGGCGCGCCA GGCCATCCTG ATGGCGATGA GCCAGGAAGA TTACATGCGC
GCGCTGGTCG GCGACGACAA CTCGCTGTGG AAGCCGCTGC CGGGCTTCTT CACGCCGGGC
ACGCCGCTCT ACACCGAGGC CGGCGGCGAG ATCCTGAAAG GCAAGCGCGA TCTGGTGGCG
GCGAAGAAGC TGCTCGAGGA AGCCGGCTAC AAGGGTGAGC CGATCACCTG CGTGGTGGCG
CAGGACCAGC CGATCACCAA GGCCTTCGGC GATGTCACGG CCGATCTGCT CAAGAAGCTC
GGCATGAATG TCGACTTTGT CGCCACCGAT TGGGGCACGG TCGGCGCCCG CCGCGCCCAG
AAGACGCCGC CCGCGCAAGG CGGCTGGCAC ATGTTCCACA CCTGGCACGC CGGCGCGGAC
TGCATCAACC CGGCGGCCTA CAACGCGCTG CGCGCCAATG GCGACAAGGC CTGGTTCGGC
TGGCCGACCA GCGAGCCGGT CGAGACGGAG ATCACCAACT GGTTCAACGC CAAGTCGCTG
GACGAGGAGA AGGCGGTCGC CGCGCGCATC AACAAGGCCG CGATCGACGA CGTTGTGTTC
GCACCCACCG GCTTCTTCCT CGGCTACACC GCGTGGCGCA AAAACGTCTC CGGCGTGACC
AAGGGGCCGA TCCCGCTGTT CTGGGGCGTG TCGAAGACCG CATAA
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| Protein sequence | MDRRTVLKGL AGAGGLALTG GFAAPAIAQG AAARTLRFVP QANLANFDPI WGTQYVVRNA
AAMVWDTLYG IDDQFVPQRQ MVESEEVSSD GLTWTFKLRP GLKFHDGTPV LAKDVVASLT
RWSARDPMGL MLKALQNELT AVDDKTFKWV LKQPYPKMLF ALGKGNAPCA FIMPERIAQT
DPFKQMTEYV GSGPFKFVKG EWVPGAKAVF EKFTDYVPRQ EKPVWLAGGK QVLVDRVEWV
IMPDPATAAA ALQNGEVDWW ENPITDLVPV LKGNKNIGVD IGDPLGNVGA FRINHLHAPF
NNVKARQAIL MAMSQEDYMR ALVGDDNSLW KPLPGFFTPG TPLYTEAGGE ILKGKRDLVA
AKKLLEEAGY KGEPITCVVA QDQPITKAFG DVTADLLKKL GMNVDFVATD WGTVGARRAQ
KTPPAQGGWH MFHTWHAGAD CINPAAYNAL RANGDKAWFG WPTSEPVETE ITNWFNAKSL
DEEKAVAARI NKAAIDDVVF APTGFFLGYT AWRKNVSGVT KGPIPLFWGV SKTA
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