Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5118 |
Symbol | |
ID | 5152719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5345235 |
End bp | 5346212 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640559893 |
Product | putative ABC transporter ATP-binding |
Protein accession | YP_001241021 |
Protein GI | 148256436 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.583435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.155944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGC CGCTGCTCCA GGTCAACGAC CTCAAGAAGC ACTTCCCGAT CTCGGGCGGC CTGTTCGGCC GCACCAAAAG CAAGGTGCAT GCGGTCGACG GCGTATCGTT CGAGATCGCG CGCGGCGAGA CGTTGTCGCT GGTCGGCGAG TCCGGCTGCG GCAAGTCGAC CGTCGGCCGC GCCATCCTCA GGCTGTTCGA CATCACCGCC GGCCAGATCG TGCTCGACGG CCTGCGCATC GACGATCTCG GCCCGCATCG GCTGCGCGAG ATGCGCCGCC GCGTGCAGGT GGTGTTCCAG GATCCGTTCT CCAGCCTCAA CCCGCGGATG CGGATCCGCG ACATCCTGGC CGAGCCGATC AACAATTTCG GCCTCGCCAA GGACGCTGCC GAGCGCGATG CGCGCATTGC CGAACTGATG GAGATCGTCC GGCTGCCGCG CGACGCGGTG AACCGACGCC CGCACGAATT CTCCGGGGGC CAGCGCCAGC GCATCGGCAT CGCCCGCGCG CTCGCCGCCA AGCCCGATTT GATCGTCTGC GACGAGGCGG TGTCCGCGCT CGACGTCTCC GTCAAGGCGC AGATCGTCAA TTTGCTGCAG GACCTGCAGC GCGAGTTCGG GTTGGCGCTG CTGTTCATCA GCCACGACCT CGCCATCGTC GAGCACATGA CGCACCGCGT CGCCGTGATG TATCTCGGCA AGATCGTCGA GATCGCGCCG CGCCGCCAGA TCTTTGCCTC GCCCGGCCAT CCCTACACCA AGGCGCTGCT CTCAGCCGTG CCGATCCCCG AACCCGGCGC CGAGCGCACC CCGATCATCC TCAAAGGCGA CGTGCCCAGC CCCGTCAACC CACCCAAAGG CTGCCGCTTC CACACCCGCT GCCCGCTGGC CTTCGACCGC TGCCGCGTGG AAGCGCCGGA GCTGCGGCTG AAGGGCGAGG ACCAGTGGGT GGCGTGTCAT CTGGAGAATG CGACGTAG
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Protein sequence | MTMPLLQVND LKKHFPISGG LFGRTKSKVH AVDGVSFEIA RGETLSLVGE SGCGKSTVGR AILRLFDITA GQIVLDGLRI DDLGPHRLRE MRRRVQVVFQ DPFSSLNPRM RIRDILAEPI NNFGLAKDAA ERDARIAELM EIVRLPRDAV NRRPHEFSGG QRQRIGIARA LAAKPDLIVC DEAVSALDVS VKAQIVNLLQ DLQREFGLAL LFISHDLAIV EHMTHRVAVM YLGKIVEIAP RRQIFASPGH PYTKALLSAV PIPEPGAERT PIILKGDVPS PVNPPKGCRF HTRCPLAFDR CRVEAPELRL KGEDQWVACH LENAT
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