Gene BBta_5114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5114 
Symbol 
ID5153083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5339923 
End bp5340960 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID640559889 
Producthypothetical protein 
Protein accessionYP_001241017 
Protein GI148256432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.227587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCA TTCGCTTCAT CAAGGCCCAG CCCACCACCT ATCTGCTCAA GTACCGCGCC 
GGAGCGGTGG TCGAGGAAGG CGCCGGGCTC TCCACCTTCT ATTACGGGCC CGCCACCTCG
CTGGTCGCGA TCCCGATCGG CAGCCGCGAC GCCGCTTTCA TCTTCCAGCA GATCGCCCGC
GACTTTCAGA CGCTGACGAT CCAGGGCCAG GTCACCTACC GCATCGGCGA GCCGAAGAAG
GCGGCGGCGA TGCTGAACTT CACGCTCAAG CGCGACGGCA AGACGTATGA GTCCGACGAT
CCCGAGGAGT TGCCGCAGCG CGTATTAGGC GCGGTCGAGG TGCTGGCGCA GCAGGCGGTC
AAGGACATGA CCCTGAAGGA AGCACTGCGG GCGTCCGACC GCATCGCCGA GGCAATCGCG
ACGGGGCTGC AGCGCCGCGC CGATATCGAT GCGCTGGGGC TGGAGATCCT CGGCGTCGCC
GTCCGCGCGG TGAAGCCGAC GCCGGAGACC GCCAAGGCGC TGGAGGCCGA AGCCCGCGAG
GCGATCCTGA AGACGGCGGA CGAGGCCATC TTCGCGCGGC GCAATTTCGC GGTCGAGCGC
GAGCGGGCGA TCCGCGAGAG CGAGCTCGAT ACCGAGATCG CGGTCGAGCA GAAGAAGCGG
GCGATCCGCG AGACGCAGAT GGATGCGGAG GCCAGCGTCG CGGCAAAGAC AAACGAGCTG
CGCGAGGCCG GCATGGTCGC CGACATCGGG CTGGAGGCCA GGCGCAAGGA TTTCGTGGCG
CTGAATGCGG CCAACACCCG CACCCTCGCC GATGCCGAGG CGTATCGGGT CGGGGCGCTG
ATGAAGATCT TCGAGGGCGT CGACACCCGC GTGATCCAGG CGCTGGCCGC GACCGGCATG
CAGCCGGGTC AGCTGATCGC GCAGGCCTTC TCAGGGCTCG CCGAGAAGGC CGAGAAGATC
GGGCAGCTCA ACGTGTCGCC GGAGCTTCTG AACAGCCTGA TGCAGAAGCC CGCGGAGGCT
GCCCGTGTCC GGCAATGA
 
Protein sequence
MFGIRFIKAQ PTTYLLKYRA GAVVEEGAGL STFYYGPATS LVAIPIGSRD AAFIFQQIAR 
DFQTLTIQGQ VTYRIGEPKK AAAMLNFTLK RDGKTYESDD PEELPQRVLG AVEVLAQQAV
KDMTLKEALR ASDRIAEAIA TGLQRRADID ALGLEILGVA VRAVKPTPET AKALEAEARE
AILKTADEAI FARRNFAVER ERAIRESELD TEIAVEQKKR AIRETQMDAE ASVAAKTNEL
REAGMVADIG LEARRKDFVA LNAANTRTLA DAEAYRVGAL MKIFEGVDTR VIQALAATGM
QPGQLIAQAF SGLAEKAEKI GQLNVSPELL NSLMQKPAEA ARVRQ