| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5109 |
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| Symbol | |
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| ID | 5152765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5334632 |
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| End bp | 5335858 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640559885 |
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| Product | putative L-carnitine dehydrogenase |
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| Protein accession | YP_001241013 |
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| Protein GI | 148256428 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.367445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCC TGCCGCTGTC TGGCATCAAG ATTCTCGACC TCACGCGCGT GCTGGCCGGA
CCGTTATCGG CCCAGATGCT GGCCGATCTC GGCGCCGAGG TGATCAAGAT CGAACGGCCC
GGCACTGGCG ACGATGCGCG CGCCTTCGGG CCGCCTTATC TCAAGGATCC GGACGGCAAG
GCCAACAACA ACAACTCGTT CTATCTCTGC GCCAACCGCA ACAAGAAGTC GGTCACGGTC
AACATCGCCT CGAGCGACGG GCAGGAGATC ATCCGCGCCC TGGCGAAAGA TTGCGACGTG
TTCATGGAGA ACTACAAGGT CGGCGATCTC AAGCGCTATG GCCTCGACTA TGAGGCGATC
AAAGCCGTCA ATCCCGACGT GATCTATTGC TCGGTCACCG GCTTCGGCCA GACCGGGCCC
TATGCGCCGC GCGCCGGCTA TGACGCGATC TTCCAGGCGA TGGGCGGGCT GATGAGCGTG
ACCGGCCACA TGGACGGCGA GCCGGGCGCC GGGCCGATGA AGGTCGGTCC CTCGATCGTC
GACTACATGA CCGGGATGAA CACCTCGATC GGCATTCTCT CGGCGCTGTA TCATCGCGAC
GTCAATGGCG GCGGCGGCCA GCATGTCGAC GTCTGCCTGT TCGACACCGT GATCGCCTCG
CTGTCGCACT ACGCCCAGAT CTTCCTGGTC AACGGCAAGT CGCCGCCGCG CCGCGGCACC
TGGGGCAATG GCGGCATGCC GGCCGGCGTG TTCCGCTGCA CCGATGGCGA ATTGATGCTG
GTGGTCGGCA ATGACGGGCA ATTCGCCCGC ACCTGCGCCG TGCTCGGCGC GCCGGAGCTC
GCCACCGATC CGAAATTCGT CAAGAACAAC GACCGCGTCG TCAACGGCAA GGAGATCATG
GCGATCTATG CCGGCCTGTT CCTGAAGAAC TCGGTCGCGC ATTGGCTGGA GCAACTGGAG
AAAGCGGGTG TGCCTTGCGG CCCCGTCAAC GATTTCGCCC ATGTGTTCGC CGATCCGCAT
GTGCGCTCGC GCGGAATGGA GGTGAAGGTC GAGCACCCGT TCGAGCCGCA ATTGTCGCTG
ATCCGCAACG CGCTCACGTT CTCCGGTACG CCGATCACGG AGTACCGCGC GCCGCCGCTG
CTCGGCGCCG ACACGCAAGA CGTGCTGTCG AGCCTCGGTT ATGACGACGC GAAGATCGCC
GCGCTGAAGC AGCAGGGTGT GGTGTAG
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| Protein sequence | MSALPLSGIK ILDLTRVLAG PLSAQMLADL GAEVIKIERP GTGDDARAFG PPYLKDPDGK
ANNNNSFYLC ANRNKKSVTV NIASSDGQEI IRALAKDCDV FMENYKVGDL KRYGLDYEAI
KAVNPDVIYC SVTGFGQTGP YAPRAGYDAI FQAMGGLMSV TGHMDGEPGA GPMKVGPSIV
DYMTGMNTSI GILSALYHRD VNGGGGQHVD VCLFDTVIAS LSHYAQIFLV NGKSPPRRGT
WGNGGMPAGV FRCTDGELML VVGNDGQFAR TCAVLGAPEL ATDPKFVKNN DRVVNGKEIM
AIYAGLFLKN SVAHWLEQLE KAGVPCGPVN DFAHVFADPH VRSRGMEVKV EHPFEPQLSL
IRNALTFSGT PITEYRAPPL LGADTQDVLS SLGYDDAKIA ALKQQGVV
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