Gene BBta_5108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5108 
Symbol 
ID5152579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5333222 
End bp5334355 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content64% 
IMG OID640559884 
Producttransposase 
Protein accessionYP_001241012 
Protein GI148256427 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.341163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGC GACGAGAGTT TGTGATGCTT GCCAAGCAGG AGGGCGTGAA CCGGCGGAAG 
CTGTGCCGTC AGTTCGGCAT CAGCGCCGAG ACCGGCTACA AGTGGATCCA GCGGTATGAC
GCCGGCGATA CGACGCTGGC GGACCGGTCG CGGCGGCCGC ATCGGAGTCC GGAGCGCACG
GCGGCTGCGA CTGAGCAGCA GATCGTCGCG TTGCGCGACG CTCACCCGGC CTGGGGCGCG
CGCAAGCTCG CACGTCGTCT CGCGCGCGAC GGGCAAACTG TCCCGGCGAT ATCCACCGTG
CACACCATCC TGCGCCGCTA CGATCGCGTG AGCGAGCCTG CAGGCACGCC GGGGCAGCCG
TACAGGCGTT TCGAGAAGGA TGCGCCCAAT CAGCTGTGGC AGATGGACTT CAAGGGGCAC
AGTGCGCTGG AGAACGGCGT GTCCTGTCAC CCGCTGACTG CGCTGGACGA CCACTCGCGC
TTCTCCGTGT GCCTGGCGGC GTGTGACAAC GAGCGCGGCT CTACGGTCAA AGGACATCTG
GAGACGACGT TCCGCCGCTA TGGACTGCCG GATGCGATGT TCGTCGATAA TGGTGGTCCC
TGGGGCTTTA CTCTCGAAGA CCCCTGGACC GCGCTGACGG TCTGGCTTCT GAAGCTCGGC
ATTCGAACGA TCCACAGCCG GCCGTATCAT CCTCAGGGCC GCGGCAAGAA CGAACGCTTC
CACCGCAGCC TGAAGGCCGA AGTCTTTGCC TTCAAGCGCT ACAGGGACCT TGACGACGTC
CAGCGGGCGC TCGACGAATG GCGGGCCGTC TACAATCTCG ACCGGCCCCA CGAGGCTCTC
GACTTCGATG TGCCGGCGAG CCGCTACCGG CCCAGCCCGC GAACGATGCC GGATCGCCTT
CCGACGGTGG AATACGACGA GGGTGAGATC GTCCGTTCGG TGTCGAGCAC CAAGGCCTAT
GTCAGTTTCG AGGGACGGCT CTGGAAAGTC CCGCAAGCCT TTCGCAGCGA GCGGCTCGCT
ATTCGCCCGC TCAGCCAGGA CGGAAAATTC GGAATTTTCT TTGCCGCGCA TCAGATCGCA
GCGATCGATT TGCGCGACCC CAAAAGTGTC AACTATGTCC CCGAACAGGT GTAA
 
Protein sequence
MDQRREFVML AKQEGVNRRK LCRQFGISAE TGYKWIQRYD AGDTTLADRS RRPHRSPERT 
AAATEQQIVA LRDAHPAWGA RKLARRLARD GQTVPAISTV HTILRRYDRV SEPAGTPGQP
YRRFEKDAPN QLWQMDFKGH SALENGVSCH PLTALDDHSR FSVCLAACDN ERGSTVKGHL
ETTFRRYGLP DAMFVDNGGP WGFTLEDPWT ALTVWLLKLG IRTIHSRPYH PQGRGKNERF
HRSLKAEVFA FKRYRDLDDV QRALDEWRAV YNLDRPHEAL DFDVPASRYR PSPRTMPDRL
PTVEYDEGEI VRSVSSTKAY VSFEGRLWKV PQAFRSERLA IRPLSQDGKF GIFFAAHQIA
AIDLRDPKSV NYVPEQV