Gene BBta_5106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5106 
Symbol 
ID5152577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5332208 
End bp5332879 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID640559882 
ProductTetR family transcriptional regulator 
Protein accessionYP_001241010 
Protein GI148256425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.146428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG ACCAGACCCG GACTGCGATC CTGACCGCCG CCGAGCGGCT CTATGCCGAG 
CGCGGCTTTT CCGAGGTGAC GCTGCGCGAC ATCGTGGCAG AGGCCAACGT CAACCTCGCC
GCGGTGAACT ATCATTTCGG CTCCAAGGAC GAATTGATCG CCGAACTGTT CGTGACCCGC
TCGATCGCGC TCAACCGCGA GCGCCTGCGC GAGCTGCGCG CGGCCGAGGA GGCCGGCGGC
GGCCGCGCCG ATATCAGCGA CATCCTGCGC GCGCTGGTCG GCCCGATCCT GCGCGGCTGC
CTTGGACCGG AGAACCAGCG CTCGCCGGTG GCGCAGTTCA TGATCCGCGC CTCGATCGAG
TCGGTGCCGC CGATCCGCCG CATCAAGACC AAGGAAATCG ACCATTTGCG CAAATTCGCC
GGCGCGATGC GGCGCGCCCT GCCCGACAGC GCCGAGGTCG ACCTGTTCTG GGGCCTGCAT
TTCGCGCTCG CCATGGCGCA TCACACCATT CGCGAGAGCG AGCGGCTGAC CAAGCTGTCC
GACGGGCAAT GCGATCTCGA CGATGTCGAG GATGTGATCG CGCGGGTGGT GCGCGGCGCC
GTGCTCGGCT TGACCGCGCG CGATCAGGCG GCAAAGTCGA AGGTCAAGGT CGCAGCGCGC
GAGGCGCGCT AG
 
Protein sequence
MATDQTRTAI LTAAERLYAE RGFSEVTLRD IVAEANVNLA AVNYHFGSKD ELIAELFVTR 
SIALNRERLR ELRAAEEAGG GRADISDILR ALVGPILRGC LGPENQRSPV AQFMIRASIE
SVPPIRRIKT KEIDHLRKFA GAMRRALPDS AEVDLFWGLH FALAMAHHTI RESERLTKLS
DGQCDLDDVE DVIARVVRGA VLGLTARDQA AKSKVKVAAR EAR