Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5106 |
Symbol | |
ID | 5152577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5332208 |
End bp | 5332879 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640559882 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001241010 |
Protein GI | 148256425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.146428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCG ACCAGACCCG GACTGCGATC CTGACCGCCG CCGAGCGGCT CTATGCCGAG CGCGGCTTTT CCGAGGTGAC GCTGCGCGAC ATCGTGGCAG AGGCCAACGT CAACCTCGCC GCGGTGAACT ATCATTTCGG CTCCAAGGAC GAATTGATCG CCGAACTGTT CGTGACCCGC TCGATCGCGC TCAACCGCGA GCGCCTGCGC GAGCTGCGCG CGGCCGAGGA GGCCGGCGGC GGCCGCGCCG ATATCAGCGA CATCCTGCGC GCGCTGGTCG GCCCGATCCT GCGCGGCTGC CTTGGACCGG AGAACCAGCG CTCGCCGGTG GCGCAGTTCA TGATCCGCGC CTCGATCGAG TCGGTGCCGC CGATCCGCCG CATCAAGACC AAGGAAATCG ACCATTTGCG CAAATTCGCC GGCGCGATGC GGCGCGCCCT GCCCGACAGC GCCGAGGTCG ACCTGTTCTG GGGCCTGCAT TTCGCGCTCG CCATGGCGCA TCACACCATT CGCGAGAGCG AGCGGCTGAC CAAGCTGTCC GACGGGCAAT GCGATCTCGA CGATGTCGAG GATGTGATCG CGCGGGTGGT GCGCGGCGCC GTGCTCGGCT TGACCGCGCG CGATCAGGCG GCAAAGTCGA AGGTCAAGGT CGCAGCGCGC GAGGCGCGCT AG
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Protein sequence | MATDQTRTAI LTAAERLYAE RGFSEVTLRD IVAEANVNLA AVNYHFGSKD ELIAELFVTR SIALNRERLR ELRAAEEAGG GRADISDILR ALVGPILRGC LGPENQRSPV AQFMIRASIE SVPPIRRIKT KEIDHLRKFA GAMRRALPDS AEVDLFWGLH FALAMAHHTI RESERLTKLS DGQCDLDDVE DVIARVVRGA VLGLTARDQA AKSKVKVAAR EAR
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