Gene BBta_5088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5088 
SymbolnusG 
ID5152174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5313472 
End bp5314029 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content63% 
IMG OID640559864 
Producttranscription antitermination protein NusG 
Protein accessionYP_001240993 
Protein GI148256408 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.120932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.503676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG CAACGCATTC GTCCGACAAG CGCTGGTACA TCGTCCACGC CTATTCGAAC 
TTCGAGAAGA AAGTCGCCGA GTCGATCCGC GAGCAGGCCA AGCAGCGCAA CCTCGAGGAC
CTGTTCGAGC AGGTCCTGGT GCCGCTCGAG AAGGTCACCG AAGTGCGCCG CGGCCGCAAG
ATCGACGCCG AGCGCAAGTT CTTCCCCGGC TATGTGCTGG TGAAGATGAA GCTGACCGAC
GAGGCGTTTC ACCTGATCAA GAACACGCCC AAGGTGACCG GCTTCCTCGG CGCCGAGAAC
AAGCCGATGC CGATCTCCGA GAGCGAGGCG ATGCGCATCC TGAATCAGAT GCAGGAAGGC
GTGGAGCGGC CGAAATCCTC GGTGTCGTTC GAGATCGGCG AGAATGTGCG CGTCGCCGAT
GGCCCGTTCG CCTCGTTCTC CGGCGTGGTC GAGGAAATCG ACGAGGCCCG CTCGCGGGTC
AAGGTCGCCG TGTCGATCTT CGGCCGCGCC ACCCCGGTCG AGCTCGAATT CAACCAGGTC
GAGAAGATCG TCGGCTGA
 
Protein sequence
MATATHSSDK RWYIVHAYSN FEKKVAESIR EQAKQRNLED LFEQVLVPLE KVTEVRRGRK 
IDAERKFFPG YVLVKMKLTD EAFHLIKNTP KVTGFLGAEN KPMPISESEA MRILNQMQEG
VERPKSSVSF EIGENVRVAD GPFASFSGVV EEIDEARSRV KVAVSIFGRA TPVELEFNQV
EKIVG