| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5086 |
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| Symbol | rplA |
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| ID | 5152172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5311951 |
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| End bp | 5312643 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559862 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001240991 |
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| Protein GI | 148256406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00155922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.872957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCG GAAAGCGTTT GAAGAAGGCC CGCGAGGGCA TCGACCGCAC CAAGCTGTAT
CCGCTTGCTG ACGCGATCAA GATGATCAAA GAGCGCGCGG TGTCGAAGTT CGACGAGACC
ATCGAGGTCG CGATCAATCT CGGCGTCGAT CCGCGTCACG CCGACCAGAT GGTCCGTGGC
GTCGTGATGC TGCCGAACGG CACCGGCCGT ACGCTCCGCG TCGGCGTGTT CGCCCGCGGC
GCGAAGGCCG AGGAAGCCAA GGCCGCTGGT GCCGACGTGG TCGGCGCTGA GGACCTGGTC
GAGAAGGTGC AGAACGGCAA TATCGATTTC GACCGCTGCA TCGCCACCCC CGATATGATG
CCGCTGGTCG GCCGTCTCGG TAAGGTGCTC GGTCCGCGCG GCATGATGCC GAACCCGAAG
ATCGGTACCG TGACGATGGA CGTCGCCGGC GCCGTCAAGG GGGCCAAGGG CGGTTCGGTC
GAGTTCCGCG TCGAGAAGGC CGGCATCATC CAGGCCGGCG TCGGCAAGGC CTCGTTCGCC
GAGGACAAGC TGGTCGAGAA CATCAAGGCG CTGGCGGACG CGGTCGTGAA GGCCAAGCCG
GCAGGCGCCA AGGGCACCTA TGTCCAGCGC GTCGCCGTGT CGTCGACGAT GGGCCCGGGC
GTCAAGGTCG AGCCGGGCAC CGTGCTGGCG TAA
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| Protein sequence | MAIGKRLKKA REGIDRTKLY PLADAIKMIK ERAVSKFDET IEVAINLGVD PRHADQMVRG
VVMLPNGTGR TLRVGVFARG AKAEEAKAAG ADVVGAEDLV EKVQNGNIDF DRCIATPDMM
PLVGRLGKVL GPRGMMPNPK IGTVTMDVAG AVKGAKGGSV EFRVEKAGII QAGVGKASFA
EDKLVENIKA LADAVVKAKP AGAKGTYVQR VAVSSTMGPG VKVEPGTVLA
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