| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5075 |
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| Symbol | rpsL |
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| ID | 5151668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5293452 |
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| End bp | 5293823 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640559853 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001240982 |
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| Protein GI | 148256397 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.27607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.189155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACGA TCAACCAGCT GATCGCAAAT CCGCGCGAAG TGCAGAAGTC GCGCAAGAAG
GTGCCGGCGC TGCAGCAGTC GCCGCAGAAG CGTGGTGTTT GTACGCGCGT CTACACCACG
ACTCCGAAGA AGCCGAACTC GGCGCTTCGT AAGGTCGCCA AGGTGCGCCT GACCAACGGC
TTTGAGGTGA TCGGCTACAT CCCGGGTGAG GGCCATAACC TGCAGGAGCA CTCGGTGGTT
ATGATCCGCG GCGGCCGCGT CAAGGACTTG CCGGGCGTGC GCTATCACAT CCTGCGCGGT
GTGCTGGATA CGCAGGGCGT CAAGAATCGT AAGCAGCGCC GCTCGAAGTA CGGCGCCAAG
CGTCCGAAGT GA
|
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| Protein sequence | MPTINQLIAN PREVQKSRKK VPALQQSPQK RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVIGYIPGE GHNLQEHSVV MIRGGRVKDL PGVRYHILRG VLDTQGVKNR KQRRSKYGAK
RPK
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