| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5071 |
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| Symbol | rpsJ |
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| ID | 5151618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5289134 |
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| End bp | 5289442 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640559849 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001240978 |
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| Protein GI | 148256393 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.755306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGGCC AGAATATCCG CATCCGTCTC AAGGCGTTCG ACCATCGAAT CCTCGATACG
TCGACGCGCG AGATCGTCAA CACGGCGAAA CGGACGGGCG CGCAGGTTCG CGGACCCATT
CCGCTGCCGA CCCGCATCGA GAAGTTCACC GTGAACCGTT CGCCGCACGT CGACAAGAAG
AGCCGCGAGC AGTTCGAGAT GCGCACCCAC AAGCGCCTGC TCGACATCGT CGATCCGACC
CCGCAGACCG TCGATGCTCT CATGAAGCTC GATCTGGCGG CCGGCGTCGA CGTCGAGATC
AAGCTCTAA
|
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| Protein sequence | MNGQNIRIRL KAFDHRILDT STREIVNTAK RTGAQVRGPI PLPTRIEKFT VNRSPHVDKK
SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KL
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