| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5069 |
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| Symbol | rplD |
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| ID | 5151616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5287736 |
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| End bp | 5288356 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559847 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001240976 |
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| Protein GI | 148256391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.312873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.444752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGA AAGTCACCAC GCTTGAGGGC AAGGACGCTG GCTCTGTCCA GCTGTCCGAC
GCCATCTTCG GTCTTGAGCC GCGCGTCGAC ATCATCCAGC GCTGTGTTCA GTGGCAGCTG
AACAAGCGTC AGGCCGGCAC GCACAAGGCC AAGGGCCGCG CCGAGATCTG GCGCACCGGC
AAGAAGATGT ACAAGCAGAA GGGCACCGGC GGCGCCCGTC ACGGCTCGGC GCGCGTGCCG
CAGTTCCGCG GCGGTGGTCG TGCCTTCGGT CCGGTCGTGC GCTCGCATGC GACCGACCTG
CCGAAGAAGG TGCGCGCGCT GGCGCTGAAG CATGCGCTGT CGGCCAAGGC CAAGGACGGT
GATCTGGTCG TGCTGGAGAA CGCCACCCTC GAGGCGGCGA AGACCAAGGC GCTGATCGGC
CACTTCTCGG GTCTCGGCCT GACCAACGCG CTGATCATCG ACGGCGCCGA GCTGCACAAC
GGCTTCGCCG CTGCGGCCCG GAACATCCCG AACCTTGACG TGCTGCCGAT CCAGGGCATC
AACGTCTATG ACATTCTCCG CCGCCAGAAG CTCGTTCTGA CCAAGGCGGC GATCGATGCG
CTGGAGGCGC GCTTCAAATG A
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| Protein sequence | MELKVTTLEG KDAGSVQLSD AIFGLEPRVD IIQRCVQWQL NKRQAGTHKA KGRAEIWRTG
KKMYKQKGTG GARHGSARVP QFRGGGRAFG PVVRSHATDL PKKVRALALK HALSAKAKDG
DLVVLENATL EAAKTKALIG HFSGLGLTNA LIIDGAELHN GFAAAARNIP NLDVLPIQGI
NVYDILRRQK LVLTKAAIDA LEARFK
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