Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5058 |
Symbol | rplE |
ID | 5150973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5282926 |
End bp | 5283483 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640559836 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001240965 |
Protein GI | 148256380 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.887024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA CCGCTTACAC CCCGCGCCTC CGCACGGAAT ATGATCGCAA GATCAAGAGC GCGCTGACCG AGAAGTTCGG CTATGCCAAC GTCATGCAGG TGCCGCGGCT CGACAAGGTC GTGCTGAACA TGGGCATCGG CGAGGCCGTC AACGACCGCA AGAAGGCGGA GACGGCGGCG GCCGATCTGT CGCTGATTGC CGGCCAGAAG GCGGTCGTGA CCTATTCGCG CGTCGCCATC GCGACCTTCA AGCTGCGTGA GAACCAGCCG ATCGGCTGCA AGGTCACGCT GCGCAAGGCC AAGATGTACG AGTTCATCGA CCGCCTGATC AACGTCGCGC TGCCGCGCGT CCGCGACTTC CGCGGCCTGA ACCCGAAGAG CTTCGACGGC CGCGGCAACT ACTCGCTCGG CATCAAGGAG CACATCATTT TCCCCGAGAT CGACTTCGAC AAGGCCGGGG AGAGCTGGGG CATGGACATC ACGGTGTGCA CCACCGCGGC GACCGATGAC GAGGCCCGTG CCCTTCTGAC CGCATTCAAT TTCCCGTTCC GGCAGTGA
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Protein sequence | MAETAYTPRL RTEYDRKIKS ALTEKFGYAN VMQVPRLDKV VLNMGIGEAV NDRKKAETAA ADLSLIAGQK AVVTYSRVAI ATFKLRENQP IGCKVTLRKA KMYEFIDRLI NVALPRVRDF RGLNPKSFDG RGNYSLGIKE HIIFPEIDFD KAGESWGMDI TVCTTAATDD EARALLTAFN FPFRQ
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