Gene BBta_5058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5058 
SymbolrplE 
ID5150973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5282926 
End bp5283483 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content63% 
IMG OID640559836 
Product50S ribosomal protein L5 
Protein accessionYP_001240965 
Protein GI148256380 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.887024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CCGCTTACAC CCCGCGCCTC CGCACGGAAT ATGATCGCAA GATCAAGAGC 
GCGCTGACCG AGAAGTTCGG CTATGCCAAC GTCATGCAGG TGCCGCGGCT CGACAAGGTC
GTGCTGAACA TGGGCATCGG CGAGGCCGTC AACGACCGCA AGAAGGCGGA GACGGCGGCG
GCCGATCTGT CGCTGATTGC CGGCCAGAAG GCGGTCGTGA CCTATTCGCG CGTCGCCATC
GCGACCTTCA AGCTGCGTGA GAACCAGCCG ATCGGCTGCA AGGTCACGCT GCGCAAGGCC
AAGATGTACG AGTTCATCGA CCGCCTGATC AACGTCGCGC TGCCGCGCGT CCGCGACTTC
CGCGGCCTGA ACCCGAAGAG CTTCGACGGC CGCGGCAACT ACTCGCTCGG CATCAAGGAG
CACATCATTT TCCCCGAGAT CGACTTCGAC AAGGCCGGGG AGAGCTGGGG CATGGACATC
ACGGTGTGCA CCACCGCGGC GACCGATGAC GAGGCCCGTG CCCTTCTGAC CGCATTCAAT
TTCCCGTTCC GGCAGTGA
 
Protein sequence
MAETAYTPRL RTEYDRKIKS ALTEKFGYAN VMQVPRLDKV VLNMGIGEAV NDRKKAETAA 
ADLSLIAGQK AVVTYSRVAI ATFKLRENQP IGCKVTLRKA KMYEFIDRLI NVALPRVRDF
RGLNPKSFDG RGNYSLGIKE HIIFPEIDFD KAGESWGMDI TVCTTAATDD EARALLTAFN
FPFRQ