Gene BBta_5048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5048 
SymbolrpsM 
ID5150406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5276842 
End bp5277210 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content62% 
IMG OID640559826 
Product30S ribosomal protein S13 
Protein accessionYP_001240955 
Protein GI148256370 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0590197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.99624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGTA TTGCCGGTGT CAATATCCCG ACCAACAAGC GCGTCCTGAT CGCGCTCCAG 
TACATCCATG GCATTGGCCC GAAGATCGCG AGCGAGATCA TTGAAAAGGT CAAGATCGCC
GAGGATCGCC GTGTCAACCA GCTGAGCGAC CAGGAAGTCC TGCAGATCCG CGAAATCATC
GACCGCGACT ACGTCGTCGA GGGCGACCTG CGGCGCGAGA CCGGCATCAA CATCAAGCGG
CTGATGGACC TCGGCTGCTA CCGCGGCCTG CGTCATCGCC GTGGCCTGCC GGTTCGCGGT
CAGCGCACGC ATACCAATGC GCGCACGCGC AAGGGTCCTG CCAAGGCGAT CGCCGGCAAG
AAGAAGTAA
 
Protein sequence
MARIAGVNIP TNKRVLIALQ YIHGIGPKIA SEIIEKVKIA EDRRVNQLSD QEVLQIREII 
DRDYVVEGDL RRETGINIKR LMDLGCYRGL RHRRGLPVRG QRTHTNARTR KGPAKAIAGK
KK