| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5047 |
|---|
| Symbol | rpsK |
|---|
| ID | 5149762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5276323 |
|---|
| End bp | 5276712 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640559825 |
|---|
| Product | 30S ribosomal protein S11 |
|---|
| Protein accession | YP_001240954 |
|---|
| Protein GI | 148256369 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0100] Ribosomal protein S11 |
|---|
| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0249835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG AAGCCACACG TGTCCGCCGT CGTGAGCGCA AGAACATCGC CTCCGGCGTC
GCCCATGTGA ACTCGTCGTT CAACAACACC ACCATCACCA TCACCGATGC GCAGGGCAAC
ACCATCGCCT GGTCGTCGGC TGGCACGATG GGCTTCAAGG GATCGCGCAA GTCGACCCCA
TACGCGGCGC AGGTCGCGGC GGAGGACGTG TCCAAGAAGG CCCAGGAGCA CGGCATGCGC
ACCCTCGAGG TCGAGGTCGC CGGTCCGGGC TCCGGACGTG AATCGGCGTT GCGCGCGCTG
CAGGCCGCTG GCTTCACCGT CACCTCGATC CGCGACGTGA CGACGATCCC GCACAATGGT
TGCCGTCCGC GGAAGCGTCG TCGCGTTTGA
|
|---|
| Protein sequence | MAKEATRVRR RERKNIASGV AHVNSSFNNT TITITDAQGN TIAWSSAGTM GFKGSRKSTP
YAAQVAAEDV SKKAQEHGMR TLEVEVAGPG SGRESALRAL QAAGFTVTSI RDVTTIPHNG
CRPRKRRRV
|
|---|
| |