| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5038 |
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| Symbol | |
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| ID | 5150468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5266565 |
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| End bp | 5267959 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559816 |
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| Product | serine protease |
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| Protein accession | YP_001240945 |
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| Protein GI | 148256360 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.431803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTGA TTCGCTCCAC CGTGGTTCTG CTGCTGTCGC TGCTGGCCGC CACTCCGCTC
GCGGCGCAGG AGCGGCGCGT ACCGCAATCC CCGGCCGAGC TGCGGCTGTC CTATGCGCCG
ATCGTGCAGC GCGTGCAGCC GGCGGTCGTC AACGTCTACG CCGCCAAGGT GGTGCAGAAC
CGCAATCCGT TCCTCGACGA TCCGATCTTC CGCCGCTTCT TCGGCCTGCA GGGCGGGCCG
CAGGAGCAGA TGCAGCGCTC GCTCGGCTCG GGCGTGATGG TCGATGCGTC GGGCCTGGTG
GTCACCAACG TGCACGTCAT CGAGGGCGCC GACGAGGTGA AGGTGTCGCT GTCGGACAAG
CGCGAGTTCG AGGCCGAGAT CGTGCTGAAG GACAGCCGTA CCGATCTTGC CGTGCTCAGG
CTCAAAGGCA CGCGCGAGAC CTTTCCGACG CTCGACCTCG CCAATTCCGA TGACCTCCTG
GTCGGCGACG TCGTGCTCGC AATCGGCAAT CCGTTCGGCG TCGGCCAGAC CGTCACGCAT
GGCATCGTCT CGGCGCTGGC GCGCACCCAG GTCGGCATCA CCGACTATCA ATTCTTCATC
CAGACCGATG CCGCGATCAA TCCCGGCAAT TCCGGTGGCG CGCTGGTCGA CATGACCGGC
CGTCTGGTCG GTATCAACAC GGCGATCTAT TCCAAGTCCG GCGGTTCGCA GGGAATCGGC
TTCGCGATTC CCGCCAACAT GGTGCGCGTC GTCGTGGCCT CGGCCAAGAG TGGCGGCAAG
GCGGTGAAGC GTCCGTGGCT CGGCGCGCGG CTGCAGGCGG TGACGCCGGA GATCGCCGAG
AGCCTGGGTC TGCGCTCACC CACCGGCGCG CTGGTCGCCT CCGTCGTTCC GAACAGCCCG
GCGGCGAAAG CGGGCATCAA ATCGTCGGAC CTGATCGTGT CGATCGACGG CCAGACCGTC
GATGATCCGA ACGCCTTCGA CTATCGCTTC GCGACCCGTC CGCTCGGCGG CAACGCGCAG
ATCGAGGTGC AGCGGAGTGG CAAGCCGGTG AAGGTCGCGG TGGCGCTGGA GACGGCGCCT
GACACCGGGC GCAACGAGAT GGTCATCAAC GGCCGCTCGC CGTTCCAGGG CGCCAAGGTG
GCCAACATCT CGCCCGCGGT GGCCGATGAG CTGCATCTCG ACGCCGACAC CGAAGGCGTC
GTCGTGCTCG AGCCGGGCGA CGGCACCACG GCGGCCAATG TCGGCTTCCA GAAGGGCGAC
GTGATCATGG CCGTCAACAA CCAGAAGATT GCCAAGACCG CCGATCTCGA CAAGGCCTCG
CGCGAGTCTG CGCGCATCTG GCGTATCACC GTGCTGCGCG GTGGCCAGCA GATCAACGTC
ACGCTCGGCG GATGA
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| Protein sequence | MTLIRSTVVL LLSLLAATPL AAQERRVPQS PAELRLSYAP IVQRVQPAVV NVYAAKVVQN
RNPFLDDPIF RRFFGLQGGP QEQMQRSLGS GVMVDASGLV VTNVHVIEGA DEVKVSLSDK
REFEAEIVLK DSRTDLAVLR LKGTRETFPT LDLANSDDLL VGDVVLAIGN PFGVGQTVTH
GIVSALARTQ VGITDYQFFI QTDAAINPGN SGGALVDMTG RLVGINTAIY SKSGGSQGIG
FAIPANMVRV VVASAKSGGK AVKRPWLGAR LQAVTPEIAE SLGLRSPTGA LVASVVPNSP
AAKAGIKSSD LIVSIDGQTV DDPNAFDYRF ATRPLGGNAQ IEVQRSGKPV KVAVALETAP
DTGRNEMVIN GRSPFQGAKV ANISPAVADE LHLDADTEGV VVLEPGDGTT AANVGFQKGD
VIMAVNNQKI AKTADLDKAS RESARIWRIT VLRGGQQINV TLGG
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