| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5024 |
|---|
| Symbol | |
|---|
| ID | 5150458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5252891 |
|---|
| End bp | 5254423 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640559804 |
|---|
| Product | putative propionyl-CoA carboxylase beta chain |
|---|
| Protein accession | YP_001240933 |
|---|
| Protein GI | 148256348 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.541202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA TCCTGGACAC CCTCGAAACG CGGCGCGCGG GCGCGCGGCT GGGCGGCGGC
GAGAAGCGCA TTGAGGCGCA GCATGCGCGC GGCAAGCTGA CGGCCCGCGA GCGCATCGAG
CTCCTGCTCG ACAAGGGCTC CTTCGAGGAG TTCGACATGT TCGTCGAGCA CCGTTCGACC
GAGTTCGGCA TGGAGAAGAC CAAGGTCCCC GGCGACGGGG TCGTCACCGG CTGGGGCACC
GTCAACGGCC GCAAGACCTT CGTCTTTGCC AAGGATTTCA CCGTGTTCGG CGGCTCGCTG
TCCGAGACCC ATGCGCTCAA GATCACCAAG CTGCAGGACA TGGCGATGAA GGCGCGCGCG
CCGATCATCG GCCTCTATGA TGCCGGCGGC GCCCGCATCC AGGAGGGCGT CGCGGCGCTC
GCGGGCTATT CCTATGTGTT CCGCCGCAAC GTGCTGGCGT CCGGCGTGAT CCCGCAGATC
TCGGTCATCA TGGGTCCCTG CGCCGGCGGC GACGTCTATT CGCCGGCCAT GACCGACTTC
ATCTTCATGG TGAAGAACAC CAGCTATATG TTTGTCACCG GGCCCGACGT CGTGAAGACC
GTCACCAATG AGGTGGTCAC GGCGGAAGAG CTCGGCGGTG CCTCCGTGCA TGCGACGCGC
TCTTCGATCG CCGACGGCGC CTTCGACAAT GACGTCGAGA CGCTGCTGCA GATGCGCCGT
CTGATCGACT TCCTGCCGTC GAACAACACC GACGGCGTGC CGGAATGGCC GAGCTTCGAC
GACATCGAGC GCGTCGACAT GTCGCTGGAT ACGCTGATCC CCGACAATCC GAACAAGCCC
TATGACATGA AGGAGCTGAT CCTGAAGGTC GTCGACGAGG GCGATTTCTT CGAGATTGCC
GAGGGCTTCG CCAAGAACAT CGTCACCGGC TTCGGTCGCA TCGCCGGCCG CACGGTCGGC
TTCGTCGCCA ACCAGCCGAT GGTGCTGGCG GGCGTGCTCG ACTCGGACGC CTCGCGCAAG
GCCGCGCGCT TCGTCCGCTT CTGCGATGCC TTCAACATCC CGATCGTCAC CTTCGTTGAC
GTGCCGGGCT TCCTGCCTGG CACCGCGCAG GAATATGGCG GCCTGATCAA GCATGGCGCG
AAGCTGCTGT TCGCCTATTC GCAGTGCACG GTGCCGCTGG TCACGGTCAT CACCCGCAAG
GCCTATGGCG GCGCCTTCGA CGTCATGGCC TCCAAGGAGA TCGGCGCCGA CATGAACTAC
GCTTGGCCGA CGGCGCAGAT CGCGGTGATG GGCGCCAAGG GCGCGGTCGA GATCATCTTC
CGCGCCGATA TGGCGGACCC GGAGAAGATT GCCGCGCGCA CCAAGGAATA TGAGGACCGC
TTCCTGTCGC CGTTCATCGC CGCCGAGCGC GGCTATATCG ACGACGTGAT CATGCCGCAC
TCCACCCGCC GCCGCATCGC CCGTGCGCTC GCGATGCTCA GGGACAAGAA GATGGAAATG
CCGGCGAAGA AGCACGACAA TCTGCCACTG TAA
|
|---|
| Protein sequence | MKDILDTLET RRAGARLGGG EKRIEAQHAR GKLTARERIE LLLDKGSFEE FDMFVEHRST
EFGMEKTKVP GDGVVTGWGT VNGRKTFVFA KDFTVFGGSL SETHALKITK LQDMAMKARA
PIIGLYDAGG ARIQEGVAAL AGYSYVFRRN VLASGVIPQI SVIMGPCAGG DVYSPAMTDF
IFMVKNTSYM FVTGPDVVKT VTNEVVTAEE LGGASVHATR SSIADGAFDN DVETLLQMRR
LIDFLPSNNT DGVPEWPSFD DIERVDMSLD TLIPDNPNKP YDMKELILKV VDEGDFFEIA
EGFAKNIVTG FGRIAGRTVG FVANQPMVLA GVLDSDASRK AARFVRFCDA FNIPIVTFVD
VPGFLPGTAQ EYGGLIKHGA KLLFAYSQCT VPLVTVITRK AYGGAFDVMA SKEIGADMNY
AWPTAQIAVM GAKGAVEIIF RADMADPEKI AARTKEYEDR FLSPFIAAER GYIDDVIMPH
STRRRIARAL AMLRDKKMEM PAKKHDNLPL
|
|---|
| |