| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5013 |
|---|
| Symbol | |
|---|
| ID | 5149079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5242131 |
|---|
| End bp | 5245622 |
|---|
| Gene Length | 3492 bp |
|---|
| Protein Length | 1163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640559793 |
|---|
| Product | indolepyruvate ferredoxin oxidoreductase |
|---|
| Protein accession | YP_001240922 |
|---|
| Protein GI | 148256337 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.353185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCA ACGAGAGCGA GATCAATCTC GACCAGAAAT ACACCGCTGA TACCGGCCAT
ATTTTCCTGA CCGGCATCCA GGCCCTGGTG CGGCTGCCGA TGGCCCAGAT CCGGCGCGAC
CGCGCTGCCG GGCTCAACAC TGCGGGCTTC ATCTCCGGTT ATCGCGGCTC GCCGCTCGGC
GGCTACGATC AGCAGCTGTT CTCGGCCCGC AAGCATCTCG AGCAGTACAA CATCAAGTTC
CAGCCGGGTG TGAACGAGGA CCTCGCGGCC ACCGCGATCT GGGGCTCGCA GCAGCTGCAT
CTGTCGCCCG GCGGCAAATA TGACGGCGTG GTCGGCATCT GGTACGGCAA GGGCCCGGGC
GTCGACCGCT GCGGCGACGT GTTCCGGCAT GGCAACGCCG CCGGCTCCGC CAAGAACGGT
GGCGTGCTGT GCCTCGCCGG CGACGACCAC GGCGCCAAGT CCTCGACCGT GCCGCATCAG
TCCGACCATG CCTTCATGTC GGCGTTGATG CCCTACCTCT ACCCGTCGTC GATCCATGAG
ATGATCGAGA TGGGCCTGCT CGGCATTGCG ATGTCGCGCT ATTCCGGCTG CTGGGTCGGC
ATGAAGGTGA TCACCGAGAC GGTCGAGACC ACCGCCGAGA TCAACCTCAA CGACGAGATG
ACACCCTTCG TCATTCCCAC CGATTTCGAG ATGCCGCCGG GTGGCCTCAA TTTGCGCTGG
CCCGACGACC GCTTCGACCA GGACCGCCGG CTACAGGACT ACAAGGGCTT TGCCGCGATC
GCCTTCGCCC GCGCGAACAA GGTCAACCGC GTCACGATGG ATAGCCCGAA CGCCCGCTAC
GGCATCATGG CGTCGGGCAA GAGCTATGAG GACATCCGCC AGGCGCTGCG CGAGCTCGGT
ATCACCGAGG AGGTTGCCGC CAAGATTGGG CTCAGGCTCT ACAAGATCGG CATGCCCTGG
CCGCTGGAGC CGGAGGGAGT GCGGCAGTTC GCGGTCGGCC TCGAGGAAAT CTTCATCGTC
GAGGAGCGCC GCGAGATCGT CGAGAACCAG GTCAAGCAGG AGCTGTTCAA CTGGCGCGAC
GACGTCCGTC CCCGCATCGT CGGCAAGATG GACGAGCACG ACAAGCGTTT CCTGCCGTTC
GCCACCGAGC TCTCCGTCGC CTCGCTCGCC ACGTCGCTGA CCGAGCGTCT TCTCCGCCTC
GATCTCAACC CCGAGATCAA GGCCATGCTG CGCGCCAAGG CCGACTGGTT CAACGGCCGC
GACGCGTCGC AGATGCAACT GGTGTCGCCG GTCGCGCGCA CGCCGTATTT TTGTTCCGGC
TGTCCGCACA ACACCTCGAC CAAGGTGCCC GAGGGTAGCC GCGCGCTGGC CGGCATCGGC
TGTCACTTCA TGTCGTTGTG GATGAACCGC AACACCGAGA CCTTCACCCA TATGGGCGGC
GAAGGCGTGC CGTGGGTCGG TATCGCGCCG TTCACGAACG AGAGCCACAT CTTCGCCAAT
CTCGGCGACG GCACCTATTT CCATTCCGGC AGCCTCGCGA TCCGCCAGGC GATCGCCTCC
AAGGCCAACA TCACCTACAA GATCCTCTAC AACGACGCGG TCGCGATGAC CGGCGGCCAG
CGCCATGACG GCGACCTGTC GCCGCAGCAG ATCACCTTCC AGCTGCACGC CGAGGGCATC
CGCGAGATCT ATTTGGTCTC GGAGAATCCC GACGCTTATC CGGCGGACAG CATCGCGCCG
GGCGTCAAAA CAGCGCATCG CGACGAGCTC GAGAACGTCA TGAAGACGCT GCGCCAGACC
AAGGGCGCCT CGGCCATCGT GTTCGTGCAG ACCTGTGCGG CCGAGAAGCG CCGCCGCCGC
AAGCGCGGCA CGATGGAGGA TCCGCAGCGC CGCGTGTTCA TCAACCCGGC CGTCTGCGAA
GGCTGCGGGG ACTGCTCGGT GCAGTCGAAC TGCATCTCGG TCGAGCCGCT GGAGACCGAG
CTTGGCCGCA AGCGCGTCAT CAATCAGTCC TCCTGCAACA AGGACTATTC CTGCGTGAAG
GGCTTCTGCC CATCCTTCGT CACCATCGAC GGCGGCAAGC CGCGCTCGCG CGCGCCGGCC
GAGCTCGGCG ACATCGGCGA GATGCCGGAG CCGCTGACCA AGCCGTCGCT GGACCGGCCC
TACAACGTCG CGGTCGGCGG TGTCGGCGGC ACCGGCGTGC TGACCATCGG TGCGCTGCTC
GGTATGGCCG CGCACATCGA GGGCAAGGCT TCGATGATCC TCGACATGTC GGGCCTCGCG
CAGAAGGGCG GCGCGGTGCT GAGCCACGTC CGCCTGTCGC AGAACACCGC CGACGTGACC
TGCTCGCGCA TCGTCACCGG CACCGCCGAT CTCGTCATCG CCGCCGATGA GGTGGTGGCC
GGCGCCAAGG AGACGATCAC GCTGTGCGAT GCCGAACGCA CCCATGGCGT GATCAACAGC
CATCTGATCC CGACTGCCGA CTTTGTGCTC AATCGCGACT TCAACTTTCA GAACCGCAAG
GTGACGAGCC TGCTCGAGAC CGCGCTGCGC AAGGACTCCA CATTCTTCGA TTTCACCAAG
CCAGCCGAGG CGCTGCTCGG CGATTCCATC GCCACCAACA TGATGATGAT GGGCTACGCC
TATCAGAAGG GCCTGCTGCC GCTCTCGGCC GAGGCGATCG AGAAGGCGAT CGCGATCAAT
GGCGTTGCGG TGAAGATGAA TACCGAGGCG TTCCGGCTCG GCCGTCTGGT GGTCGTCAAT
CCCGAGCGCG TCGCCGCGAT GATGACCGGC CAGGACGAGA CGGTGCCGCC GAAAGCGCTC
GACGCCATGA CGCTGGACGA GATCATCGCC CATCGCATGA CCTATCTCAC GGCGTATCAG
AACGCACGGC TCGCCAAGCG CTATCGCAAG CTGGTCGACC AGGTTCGCGA CGCCGCCGAC
AAGGGTGGCT ATGGCGAAGC GCTGCCGCGC GCGGTCGCGA TCAATTACGC AAAACTGCTC
GCCTACAAGG ACGAGTACGA GGTGGCGCGG CTGTTCTCAG ACGGCACCTT CGAGAAGCAG
CTGCACGACG CCTTCGAGGG GGATTACAAG ATCTCCTTCA ACCTGGCGCC GCCGATCTTC
AATTCCGGCC TGGACCCGCA GGGTCGTCCG AAGAAGAAAA GCTATGGCCC GGGCATGATG
AAGATGTTCC GGCTGCTGGC GAAGCTGAAG AGCCTGCGCG GTACGCCGCT CGACATCTTC
GGCTATTCCG CCGAGCGCAA GATGGAGCGC GACCTGATCG CCGGCTACGA GAAGGACGTC
GCGACCGTGC TGAGCCTGCT GTCGCCGGCC AACGCCGACA TCGCGGCCGA ATTCCTGTCG
CTGCCCGACA AGATCCGCGG CTACGGCCCG GTCAAGGAGA AGGCGGTGCA GGACGCCAAG
GCGCGCTACG CCCAGCTCGC CGCCGACCTC GCCAGCCCGC CGCCCGCGCC ACGGCAGATG
GCGGCGGAGT AG
|
|---|
| Protein sequence | MGINESEINL DQKYTADTGH IFLTGIQALV RLPMAQIRRD RAAGLNTAGF ISGYRGSPLG
GYDQQLFSAR KHLEQYNIKF QPGVNEDLAA TAIWGSQQLH LSPGGKYDGV VGIWYGKGPG
VDRCGDVFRH GNAAGSAKNG GVLCLAGDDH GAKSSTVPHQ SDHAFMSALM PYLYPSSIHE
MIEMGLLGIA MSRYSGCWVG MKVITETVET TAEINLNDEM TPFVIPTDFE MPPGGLNLRW
PDDRFDQDRR LQDYKGFAAI AFARANKVNR VTMDSPNARY GIMASGKSYE DIRQALRELG
ITEEVAAKIG LRLYKIGMPW PLEPEGVRQF AVGLEEIFIV EERREIVENQ VKQELFNWRD
DVRPRIVGKM DEHDKRFLPF ATELSVASLA TSLTERLLRL DLNPEIKAML RAKADWFNGR
DASQMQLVSP VARTPYFCSG CPHNTSTKVP EGSRALAGIG CHFMSLWMNR NTETFTHMGG
EGVPWVGIAP FTNESHIFAN LGDGTYFHSG SLAIRQAIAS KANITYKILY NDAVAMTGGQ
RHDGDLSPQQ ITFQLHAEGI REIYLVSENP DAYPADSIAP GVKTAHRDEL ENVMKTLRQT
KGASAIVFVQ TCAAEKRRRR KRGTMEDPQR RVFINPAVCE GCGDCSVQSN CISVEPLETE
LGRKRVINQS SCNKDYSCVK GFCPSFVTID GGKPRSRAPA ELGDIGEMPE PLTKPSLDRP
YNVAVGGVGG TGVLTIGALL GMAAHIEGKA SMILDMSGLA QKGGAVLSHV RLSQNTADVT
CSRIVTGTAD LVIAADEVVA GAKETITLCD AERTHGVINS HLIPTADFVL NRDFNFQNRK
VTSLLETALR KDSTFFDFTK PAEALLGDSI ATNMMMMGYA YQKGLLPLSA EAIEKAIAIN
GVAVKMNTEA FRLGRLVVVN PERVAAMMTG QDETVPPKAL DAMTLDEIIA HRMTYLTAYQ
NARLAKRYRK LVDQVRDAAD KGGYGEALPR AVAINYAKLL AYKDEYEVAR LFSDGTFEKQ
LHDAFEGDYK ISFNLAPPIF NSGLDPQGRP KKKSYGPGMM KMFRLLAKLK SLRGTPLDIF
GYSAERKMER DLIAGYEKDV ATVLSLLSPA NADIAAEFLS LPDKIRGYGP VKEKAVQDAK
ARYAQLAADL ASPPPAPRQM AAE
|
|---|
| |