Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5005 |
Symbol | |
ID | 5150241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5235614 |
End bp | 5236003 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640559786 |
Product | hypothetical protein |
Protein accession | YP_001240915 |
Protein GI | 148256330 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.264526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0828633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAG CGAAGAAACT GCCGGCCCCG ATCACCAATC CCGAGACCAA GCCGTTCTGG GATGCCGCCG CCGAGGGCAA GTTCCTGATC AAGCGCTGCA CCGCCTGCGG CGAGGCGCAC TACTTTCCGC GCTCGATCTG CCCGTTCTGC TTCTCTGATC AGACCGTATG GGAGCAGAGC GCGGGCGAGG GGGAGATCTA CACGTTCTCG ATCATGCGCA AGTCGCCGAC AGGACCGTAT GCGATCGGTT ACGTCACCTT GAAGGAAGGA CCATCGCTGC AGACCAACTT CGTCGATTGC GATCTCGACA GCTTGAAGAT CGGCCAGAAG GTGAAGGTGG TGTTCAAGCC GACCGACGGA GCCCCGCTGC CGTTCTTCAC GCCGGTGTAG
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Protein sequence | MSEAKKLPAP ITNPETKPFW DAAAEGKFLI KRCTACGEAH YFPRSICPFC FSDQTVWEQS AGEGEIYTFS IMRKSPTGPY AIGYVTLKEG PSLQTNFVDC DLDSLKIGQK VKVVFKPTDG APLPFFTPV
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