Gene BBta_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5005 
Symbol 
ID5150241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5235614 
End bp5236003 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content61% 
IMG OID640559786 
Producthypothetical protein 
Protein accessionYP_001240915 
Protein GI148256330 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.264526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0828633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG CGAAGAAACT GCCGGCCCCG ATCACCAATC CCGAGACCAA GCCGTTCTGG 
GATGCCGCCG CCGAGGGCAA GTTCCTGATC AAGCGCTGCA CCGCCTGCGG CGAGGCGCAC
TACTTTCCGC GCTCGATCTG CCCGTTCTGC TTCTCTGATC AGACCGTATG GGAGCAGAGC
GCGGGCGAGG GGGAGATCTA CACGTTCTCG ATCATGCGCA AGTCGCCGAC AGGACCGTAT
GCGATCGGTT ACGTCACCTT GAAGGAAGGA CCATCGCTGC AGACCAACTT CGTCGATTGC
GATCTCGACA GCTTGAAGAT CGGCCAGAAG GTGAAGGTGG TGTTCAAGCC GACCGACGGA
GCCCCGCTGC CGTTCTTCAC GCCGGTGTAG
 
Protein sequence
MSEAKKLPAP ITNPETKPFW DAAAEGKFLI KRCTACGEAH YFPRSICPFC FSDQTVWEQS 
AGEGEIYTFS IMRKSPTGPY AIGYVTLKEG PSLQTNFVDC DLDSLKIGQK VKVVFKPTDG
APLPFFTPV