| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5003 |
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| Symbol | |
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| ID | 5150239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5233458 |
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| End bp | 5234336 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559784 |
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| Product | putative short-chain dehydrogenase/reductase (SDR) |
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| Protein accession | YP_001240913 |
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| Protein GI | 148256328 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.874894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0924335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTGC TCGACGGCAA GGTGGCGCTG ATCACCGGCG CTGGTGGTGG CCTCGGCGAG
GCCTATGCAA GGCTGTTCGC GCGCGAGGGC GCGGCGGTGG TGGTCAACGA TCTCGGCGGC
CCGCGTGATG GGTCCGGCTC GGATCTGTCG ATGGCCGGGC AGGTGGCGGC CGCGATCACG
GCCGAGGGCG GCCGCGCCGT CGCCAATGGC GCTGACATCT CGACCATGGC GGGCGGGCAG
TCGGTGTTCG ACGATGCGAT CCGGCATTTC GGCCGCGCCG ACATTCTGGT CAACAATGCC
GGCATCCTGC GCGACCAGAC CTTTGCCAAG TCCAGCGAGG CCGATTGGGA CAAGGTGATC
CAGGTCCACC TCAAAGGCAC TTTCTGCTGT ACCTTGCCGG TGTTCCGCTG GATGCGCGAC
AATGGCGGCG GCGTCATTGT CAACACGTCC TCGACCTCCG GGCTGATCGG CAATTTCGGC
CAGTCCAATT ACGGCGCGGC GAAGGGCGGT ATTTGGGGCC TGTCCAACGT GCTGGCGGTG
GAGGGCCGCA AGTACAACAT CCGGGTGTGG ACCCTGGCGC CGGGCGCGCT GACACGGATG
ACCGCCGACC TGCCGCGCTA CAAGGAAAAT CCGGGCGCCG CACTGACGCC CGAAGGCATC
GCGCCGGCGG TGCTGTATAT GGTCAGCCAC CTCTCCGGCG ATCAGACCGG CAAGGTGCTC
GGCGTCTCCG GCCCGCGCGG CGTGCGCGAG TTGCGCATGA TGGAAATGGA CGGCTGGAAG
CCGCCATCCT CGGCCTGGCG GCCCGAGGAC ATCGCTGTTC ATGCAGAGGA GATATTCTTT
TCGGAGGCCG ACATTCAAAA GTCCGCCCGG CGGTTTTGA
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| Protein sequence | MGLLDGKVAL ITGAGGGLGE AYARLFAREG AAVVVNDLGG PRDGSGSDLS MAGQVAAAIT
AEGGRAVANG ADISTMAGGQ SVFDDAIRHF GRADILVNNA GILRDQTFAK SSEADWDKVI
QVHLKGTFCC TLPVFRWMRD NGGGVIVNTS STSGLIGNFG QSNYGAAKGG IWGLSNVLAV
EGRKYNIRVW TLAPGALTRM TADLPRYKEN PGAALTPEGI APAVLYMVSH LSGDQTGKVL
GVSGPRGVRE LRMMEMDGWK PPSSAWRPED IAVHAEEIFF SEADIQKSAR RF
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