Gene BBta_4993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4993 
Symbol 
ID5150036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5225139 
End bp5225585 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content60% 
IMG OID640559774 
Producthypothetical protein 
Protein accessionYP_001240903 
Protein GI148256318 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.483995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.647734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TGAAGGTAGG AACCGGTGAC TGGGTCGTGG TTTGCGACGG ACGCAAGGCG 
CTGATCCTCG AAAATATCGG AGACAGCATG TTTCCGAACC TGCATACCAA GGAAGTCCAT
GAGCATGTGA ATGAACGGAC CAGCGCACAG GGAACCGATG CCCCGGGATC AGTGCAACAG
TCCGTCGGCC ATATGCGGAG CTCGGTCGAG CAGACCGATT GGCATGACCA ATCCGAACGC
GCTTTCCTCA AGCAATTGGC GGACCGCCTG CATCACGCCG TCCAGGGCGG CGAGACCAAG
GCTGTGACGA TGGTGGCGTC ACCGCGGGCT CTCGGAATGA TCCGGGCGGA TTATTCCGAC
GCCGTGCGCA AGGTGCTGCA CGGCGAGATC CACAAGGACC TGGTGAAGCT CCCGGTCTAC
GAGATCGAGA AGCAGCTGCT GGCCTGA
 
Protein sequence
MDKMKVGTGD WVVVCDGRKA LILENIGDSM FPNLHTKEVH EHVNERTSAQ GTDAPGSVQQ 
SVGHMRSSVE QTDWHDQSER AFLKQLADRL HHAVQGGETK AVTMVASPRA LGMIRADYSD
AVRKVLHGEI HKDLVKLPVY EIEKQLLA