Gene BBta_4988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4988 
Symbol 
ID5150173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5222242 
End bp5223429 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID640559769 
Productacyltransferase family 3 protein 
Protein accessionYP_001240898 
Protein GI148256313 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.639036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGACC AGCGTTTCAT CGGCTCGCTG ACCGGCCTGC GCTTCGTCGC GGCCGCGACG 
GTCGTCGTCG GGCATGGTGC GCCATCATTG GCGCGTGGCG CGCTGCCGGA ATTGATCGCC
CAGGTCAGCA GCATCGGCAT GACGATGTTC TTCGTGCTGA GCGGCTTCGT TCTCTGGCTC
AATTATGCCA AGCGCTTCCA GTCACAATCG CTACGCTCCG CCTTGCGCGA ATTCATGATT
GCGCGACTCG CTCGGCTCTA CCCGATGTAC GTCGTTGTCG TTCTCAGCAT CGTGACCTTT
CTGATGATCG TCAGGGGCGT GTCCGCACCG TCCTTGGGAT TCATTCTGAC GATGACGCAA
GCTTGGTTTC CCGTGCAGAA CGGGACCATG CTGGTGGCGG TCGTTCCGCC GCTGCAGCAC
CTCTGGTCCA TCAGCGTGGA GCTGTTTTTC TACCTCCTCT TCCCCTTCGT CTGCCTGCTG
TTCTCCGGCG TCGACAAACT GAGGACGATG ATTTGGATCG CCCTCGCGAA CATTCTGCTG
TTTGCCATGA CCATCATTGC TTTCTTCACG TGGGGCGAGC GGGTGTTACA GGTCATAGCT
CCGTCCCTCC AGCACGGCGG GATGCAGTGG CTCACTTATT ACTCGCCGTT CCTGCACCTG
TCGCAATTCG TCGCCGGGTG TCTTGCTGCC ATGATCTATC AGAACCGAGC CGAAGCCGCG
ATCGGCAGTA CAGAACGTTC CGGCGTTGCG ATCATGTTCT ATTCGGCGGC CGCGGGCCTC
GCCTGTTCGC CTGTGCTGCT GTTCCTGGAG CCGCGCCTTC CGGGTTGGTC ATTCTCGATC
GAGCTTGCCG TGTGTCTCCT CGAGATCGTC GGATTTTCCG TCGTCTTCCT CGGGACCAGC
CGCTATGGCC ACGGTCGCTG GCTGTCATCC CGCGCCCTGG TGATCGGCGG GGAATGCAGC
TATTCGATCT ATCTGCTGCA CCCGTTCCTG ATCCGGCTCG CGATGCTCGG CAAGTCCGAA
GATCCCGGCG CGTTGGAATT GATGCTTCGA TTGGGGTTGT TCGTCGCCAT TGCAACGGCC
GTGGCATGGG TCACCTACGC GCTGATCGAG GCGCCATCGC GCTCATGGCT GCGCAAGGCG
TTCCGCACCC GCCCGCCACG CGAGGTTCTC CATCCGAAGT CCGGCTAA
 
Protein sequence
MNDQRFIGSL TGLRFVAAAT VVVGHGAPSL ARGALPELIA QVSSIGMTMF FVLSGFVLWL 
NYAKRFQSQS LRSALREFMI ARLARLYPMY VVVVLSIVTF LMIVRGVSAP SLGFILTMTQ
AWFPVQNGTM LVAVVPPLQH LWSISVELFF YLLFPFVCLL FSGVDKLRTM IWIALANILL
FAMTIIAFFT WGERVLQVIA PSLQHGGMQW LTYYSPFLHL SQFVAGCLAA MIYQNRAEAA
IGSTERSGVA IMFYSAAAGL ACSPVLLFLE PRLPGWSFSI ELAVCLLEIV GFSVVFLGTS
RYGHGRWLSS RALVIGGECS YSIYLLHPFL IRLAMLGKSE DPGALELMLR LGLFVAIATA
VAWVTYALIE APSRSWLRKA FRTRPPREVL HPKSG