Gene BBta_4965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4965 
Symbol 
ID5153410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5205961 
End bp5207334 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content61% 
IMG OID640559755 
Producthypothetical protein 
Protein accessionYP_001240884 
Protein GI148256299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.580527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCG TCGTCGTCGT CCCTGGCATT ATGGGCACCG AACTGTTGCT CCACGAAGAG 
GGCGGCGGCG CAGAACGAGT CTGGCCTCCG ACGGCTGCGG AAACGCAGTT TGGCTATAGG
CGCCGCGACA AGCTCGCCAG CCCGAAGGCA AGGCCAGGCA ATATCATTCT GAACGTCCTC
TGCTTCGATT TTTATGCACC TCTGCTCGAC TGCGTTCGCG ATCTGGGCTT CACGCCGGAT
GGCGCCGACC AAAGAGTCAT TGCCTTTCCA TATGACTGGC GGCGGGATTT GTTCGATACG
GCGGCTGCTC TCGCCGACGC ACTCGACGGC GCACATGCGG CCGGCGCCTC GCAAATATCG
CTCGTCGCGC ATTCGATGGG GGGGCTCGTC TGTCGCCTGC TGCTGGAAGC CGACACGTGG
AGAGGCCGCC CCTGGTTCGC TTCCGTCATG CAATTGATTG CGATCTCAAC GCCGCATTTG
GGCGCTCCGC TCGCGCTCGG GCGAATCCTG GGTGTTGACG CTGCGCTTGG AATCAGCGGC
AAGGATTTCG CCTGGCTCGC CAACAACGAG GCGTTTCCGT CGGCCTATCA GCTCCTGCCG
CCTCCGGGCG AGGCGACGTG CTGGAATCAG GCAGACCCCG GACTCGCCAG CCTCGACATC
TATGATCCCG ACGTGGCTGA TGCGCTCGGG TTGAACCTCA CGCTGCTCGG TCGAGCGAGG
GCCCTCCATG ACGTTCTCGG AGGCGGTAAC GCGCCGGCAG CGGTTCGCTA TTTTTTCTTC
GCCGCAACTG GGCATCGCAC GCCCACCCGT GTGAACGTGT TTCGCGCAGA GAACGGAGTA
TTCTTGGCCG ACCAGACCGT GCTCACGCGC ACAATCGACG CCGGAGACGG TACGGTTCCG
ATGTTCAGCG CGCTGCCACG GGCCGGCCAG CGACACATCG CCGTGAACGA ACACGCATCT
GCTTTCAAGG GCGAAGCTTT TCGGAGGGTA TTCGTGCGGT TACTGGGTGG TGATGAAGGG
GCCGCCCTCG AAGACATGAC TTTAAAATTT GCTCTCTCGA TAGAAGCGCC AATAGTAACG
TCAGGCCAGA GCATCGAAGT GCTGCTATAT ACGGAAGCCG GCGTCGAAGA TTCGCAAGGC
GCCTTTGGCA CGATTTCTGG CCAGCTGGTT CTGCGGAAAA TCGGGGATAG TACCGCGGGC
GAAGAGGTTC GTCGCATGCC GCTCGAATAT AGCGGGCCTC AGATCAGTCG GCTGCGCTTC
TACCTCGCCC CTTTATCGGT ACCGGCTTAT TATCAGCTTA CGTTCGAAAG CCCGCAGGGC
AATGCAGGGC CGGAGGCGTT TGGCGTATGC ACCGAGTTGC CCAACGCGCA ATAA
 
Protein sequence
MHVVVVVPGI MGTELLLHEE GGGAERVWPP TAAETQFGYR RRDKLASPKA RPGNIILNVL 
CFDFYAPLLD CVRDLGFTPD GADQRVIAFP YDWRRDLFDT AAALADALDG AHAAGASQIS
LVAHSMGGLV CRLLLEADTW RGRPWFASVM QLIAISTPHL GAPLALGRIL GVDAALGISG
KDFAWLANNE AFPSAYQLLP PPGEATCWNQ ADPGLASLDI YDPDVADALG LNLTLLGRAR
ALHDVLGGGN APAAVRYFFF AATGHRTPTR VNVFRAENGV FLADQTVLTR TIDAGDGTVP
MFSALPRAGQ RHIAVNEHAS AFKGEAFRRV FVRLLGGDEG AALEDMTLKF ALSIEAPIVT
SGQSIEVLLY TEAGVEDSQG AFGTISGQLV LRKIGDSTAG EEVRRMPLEY SGPQISRLRF
YLAPLSVPAY YQLTFESPQG NAGPEAFGVC TELPNAQ