Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4960 |
Symbol | |
ID | 5154969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5198565 |
End bp | 5199053 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640559751 |
Product | putative insertion sequence transposase protein |
Protein accession | YP_001240880 |
Protein GI | 148256295 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00139484 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTCG TTCCTGCAGG CGTGAAAGTG CACCTGGCGC TCGGCTACAC CGACATGCGC AAAGGCATGG ATGGGCTCGC AATGCTGGTC CAGGACACGC TCAAGAAGGA TCCGTTCTCC GGTCATCTGT TTGCCTTCCG CTGCAAGAGG GCATCGATAC TGAAGGTACT CTTCTGGGAC GGAAACGGCC TTTGTCTGTT CACCAAACGC ATCGACCAGG GTGGCTTCGT ATGGCCGGTG ATGGCGAGCT ATGACGGCTC GATCACACAC ACCTCAGCCC AACCGCCAGA GGATGGCGAG CGAACACGCC GGCCAATTGA TGCGCCGCCG CTCGGCCATC GTCGAGCACC CGTTCGGTAC ACTCAAGTGC CGCGCCGGCT ATCAGCACTT CCGCGGTTTC GACAAGGTTC GCGGAGAGTG GAGCCTCACG GCGCTCTCCT ACAACTTCTC TCGCGCGGTC AACATTCTCG GCTTCGACGA CTTCGTTAG
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Protein sequence | MMFVPAGVKV HLALGYTDMR KGMDGLAMLV QDTLKKDPFS GHLFAFRCKR ASILKVLFWD GNGLCLFTKR IDQGGFVWPV MASYDGSITH TSAQPPEDGE RTRRPIDAPP LGHRRAPVRY TQVPRRLSAL PRFRQGSRRV EPHGALLQLL SRGQHSRLRR LR
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