Gene BBta_4943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4943 
Symbol 
ID5150255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5183872 
End bp5184723 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content57% 
IMG OID640559734 
Producthypothetical protein 
Protein accessionYP_001240864 
Protein GI148256279 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.141009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC GCGCCGACCT CGCACCGAAG ACGCGCCTCC TTGTCATGGA TATCTTGCAG 
TCCCTCGGCA TGGATGTGTC GAAATGGGCC GACATGAAGG GTGGGGCTAC CCGTGCGGCC
AGCAATCCTA AATACTGCTA CAACTGGTCT TTCCTTCAAC CAGGCGAATT TGTCGTCGCC
TGCCTTTGGT ATGAGAGCCT CAAGCAGCGC AGCGGCGAGC TCTATTACGA GATCAATCGA
GGCAAGTGGA TTAAGCCTCG AACCGAGCCC GGAACTGGCA GCTCAAACAA GCGAGCAAAC
GATTTTGACC AGCATCTCTG GCTCGCCTAC AGCGAGGCTC TTCCGCTTCG CGTCATATTC
GTTGATGGCC CACAGTCCGA TGGCACTAAG CCGTCTAAGG TCAACGCCCG CCGACTCGAC
GACACTGCTT GGGCAATCAC TGAGTACGAC CTCGCCACCG GTCGCTGCGT TATGGTTCGC
GGTACAGCGC CGCTCCCAGT CAAGATTAGC GCAGAAGATC TTGAACTGTC TGGCTTCGAG
GGCACCGAGA GAAGCCGATT TGTAATCCAT CGCCGACGCG AAGGTGCGAT GCGCCGGGCG
AAGATAAGCG AAGCACTCAG CAAAACTGGC AAATTGGTCT GTGAGGTGCC CAAGTGCGGA
TTTGATTTCG AGGCTCGCTA CGGCAGCTTA GGTAAGGGTT ACGCTCAAGT CCACCATTTG
ACTCCTCTCC ACAAGGCTCC TCCTGAGGGG CGCAAGATAA AGCTGTCGGA CCTGGCTATC
GTGTGCGCGA ACTGTCACGC AATGATCCAC GCGGGCGGAG AGTGCCGCGA ACTTGCTCGG
CTCATAAGAT AG
 
Protein sequence
MTARADLAPK TRLLVMDILQ SLGMDVSKWA DMKGGATRAA SNPKYCYNWS FLQPGEFVVA 
CLWYESLKQR SGELYYEINR GKWIKPRTEP GTGSSNKRAN DFDQHLWLAY SEALPLRVIF
VDGPQSDGTK PSKVNARRLD DTAWAITEYD LATGRCVMVR GTAPLPVKIS AEDLELSGFE
GTERSRFVIH RRREGAMRRA KISEALSKTG KLVCEVPKCG FDFEARYGSL GKGYAQVHHL
TPLHKAPPEG RKIKLSDLAI VCANCHAMIH AGGECRELAR LIR