| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4930 |
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| Symbol | |
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| ID | 5156308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5170344 |
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| End bp | 5171648 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559724 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, large permease component |
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| Protein accession | YP_001240854 |
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| Protein GI | 148256269 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.665139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG AAGTCATCGC TCTCTTCGTC ATCCTGTTCG CGCTGCTCGC CGGCGGGCTG
TGGATCGGGC TCACGCTCGC CTTCACCGCC ACGCTGCTGC TGGCAATGTT CCGCTCGATC
CCGCTCGACA AGCTGCTTCC GCAATATGCC TGGAACATCC TGACCACCCA GGAGCTGCTG
GCGCTGCCGC TGTTCATCCT GATGGGCGAG CTGCTGTTCC GCACCCGGCT GTCGCGCTCG
CTGTTCCAGG GCCTGGCGCC ATGGGCCGGG CTGCTGCCAG GCCGCCTGCT CCACGTCAAC
GTCATCGGCT GCACCATCTT CGCCGCGATC TCCGGCTCGT CGGCGGCGAC CACGCAGGTG
ATCGGCCGGA TGTCGCTCAA CGAGCTGCTG CGCCGCGGCT ATTCGCGCGA CATCGCGATC
GGCTCGCTGG CCGGCGCCGG CACGCTCGGC TTCCTGATCC CCCCGTCGAA CATCATGATC
ATCTATGGCG TGCTCGGCGA TGTTTCCATT CTAAAGCTCT TTACGGCCGG CGTGCTGCCG
GGTCTCTTGC TGGCCGGCAC CTTCATGGGC TGGGTCATGC TGCACACCAC GCTGAAGCCC
GCGATGGTGC CGAATGCCGA GGCACAGCTG TCGCTTGTGC CCTGGGCCGA GCGCTTCGCA
GCCTTGAAGG ATCTGGCGCC AGCGCTGTTC CTGATCGCCT GCGTGCTGGG CTCGATGTAT
GGCGGGCTCG CCACGCCATC AGAGGCCGCC GCCGTCGGCG TGCTCGGCGC GGCGCTGGTG
GCGTATTTCC AGGGCGCGAT GTCGCAGCAG GTGGTCCGGG ATGTGATGAT CGGCTCGGTC
ATCACCTGCT CGATGATCGC GCTGATCGTG CTCGGCGCCT CGATCCTCGG CAATGCTGCG
GCGTTCCTCG GCATTCCGCA GGCGGTGGCC GCTTTCGTCA AGGGGCTCGG CCTGTCGCCG
TTCATGCTGA TCGCCGTGCT GATCGTGTTC TATCTGATCC TCGGCTGCTT CCTCGACGGC
TTCTCGATGA TCGTGATGAC CCTGCCGATC GTGCTGCCGA TCGTGAAGGG CGCGGGCTTC
GACGAGGTCT GGTTCGGCAT CTTCCTGGTG CTCGCGGTCG AGATGGCCCA GATCACGCCG
CCAGTCGGCT TCAACCTGTT CGTGATCCAG GGCCTGACCG AGGACGGCCT GGGCTATATC
GCCCGCGTAA CCGCCCCCTA TCTGATCATC ATGATCGCCT TCGTGCTGCT GCTCACTTTG
TTCCCGGGCA TCGTGACGAT CCTGCCCCGG CTGCTGTATG GGTGA
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| Protein sequence | MTIEVIALFV ILFALLAGGL WIGLTLAFTA TLLLAMFRSI PLDKLLPQYA WNILTTQELL
ALPLFILMGE LLFRTRLSRS LFQGLAPWAG LLPGRLLHVN VIGCTIFAAI SGSSAATTQV
IGRMSLNELL RRGYSRDIAI GSLAGAGTLG FLIPPSNIMI IYGVLGDVSI LKLFTAGVLP
GLLLAGTFMG WVMLHTTLKP AMVPNAEAQL SLVPWAERFA ALKDLAPALF LIACVLGSMY
GGLATPSEAA AVGVLGAALV AYFQGAMSQQ VVRDVMIGSV ITCSMIALIV LGASILGNAA
AFLGIPQAVA AFVKGLGLSP FMLIAVLIVF YLILGCFLDG FSMIVMTLPI VLPIVKGAGF
DEVWFGIFLV LAVEMAQITP PVGFNLFVIQ GLTEDGLGYI ARVTAPYLII MIAFVLLLTL
FPGIVTILPR LLYG
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