| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4919 |
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| Symbol | |
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| ID | 5148842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5159679 |
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| End bp | 5161649 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640559716 |
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| Product | putative DEAD-box cold-shock protein, ATP-independent RNA helicase |
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| Protein accession | YP_001240846 |
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| Protein GI | 148256261 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.730754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.525378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCTTTC CCGCTACAGT TCCGCCGCTC GCCCGCGCGC TCGCCGAGCG CAATTATGAG
CAGCCGACCC CCGTTCAACT CGCCGTGCTC GATGACGAGG CGGTCGACCG CGACCTGCTG
GTCTCAGCCC AGACCGGCTC GGGCAAGACC GTGGCCTATG GGCTCGCGAT GGCGACGAAC
CTGCTGGGCG ACGCCGAGCG GTTCGAGCGG GCCTCGGCGC CGCTGGCGCT GATCGTTGCG
CCGACGCGCG AGCTGGCGCT GCAGGTCCAG CGCGAGCTGG CCTGGCTGTA TCAGCATGCC
GGCGCGCGGG TCGTCTCCTG CGTCGGCGGC ATGGATCCGC GCCGTGAGCA GCGCGAATTG
GAGGCGGGGG CGCACATCGT CGTCGGCACG CCCGGGCGGC TGTGCGATCA TCTGCGCCGC
GGGCGCCTCG ACATTTCGGA CTTGAGGGCG GTGGTGCTCG ACGAGGCCGA TGAGATGCTC
AATCTCGGCT TTCGCGAGGA CATGGAATTC ATCCTCAAGA CCACGCCGGA GACGCGCCGG
ACCCTGCTGT TCTCGGCGAC CTTTCCGCGC GGCATCGTGG CACTGGCCAA GCAGTATCAG
GACGACGCCT TCCGGATCGA GGTCGAAGGC GACGAAGGCG GGCACGCCGA CATCGAGTAC
CGCGCCGTCC GCATCGCCCC CGGCGATGCC GAGCATGCGG TGGTCAATCT GCTGCGCTTC
TACGAGTCGC CGAGCGCCAT CGTGTTCTGC AACACCCGCG AGGCCGTCAG GCATCTGCAG
GCGGCGCTGC TGGAGCGCGG TTTCTCGGTG GTCGCGCTAT CCGGCGAATT GACCCAGAAC
GAGCGGACGC TGGCGCTGCA GTCGCTGCGC GACGGGCGCT CGCGCGTCTG CGTGGCGACC
GATGTCGCGG CGCGCGGCAT CGACCTGGCC AATCTCGATC TCGTGATCCA TGCCGAGCTG
CCGAACGATC CCGAGGTGAT GCAGCACCGC TCGGGCCGCA CCGGCCGCGC CGGCCGCAAG
GGCGTGAGCG TGCTCCTGGT GCCGCCGGCC CGGCGGCGGC GGGCGGAGAC GCTGCTGAAC
CTGGCCGGCA TCGAAGCCGT GTGGGGAACG GCGCCGCAGG CCGACGAGAT TCGCAGGCTC
GATCACGAGC GCATGCTGCA CGATCCGGTC CTGAGCGAGG AGACGACGGC GGAGGACCAG
GCGCTCGCCC AGGCCTTGCT TGCGGAGCGC TCGCCCGAGG AGATCGCCGC CGCGCTGGCG
CGGCTCTATC GCGCCCGGCT GCCGCCGCCG GAGGACATTC TCGATCCCGC CGAGGAGCGC
GGGCGCGGCC GTCACGAGCG CGATCGCGAC AACGGGCGGC CGGGGCGCGG CGAGGAGCGT
CCGCCGCCGG TACCGCGAAC CAAGACCGGA AAGCCATCGG CGCGTCACGG CATGGGGGAG
CCCAGCGTCT GGTTCCGCGC CGCGATCGGT CGGAAAAAGA ACGCCGAAGC CCGCTGGCTG
CTGCCGATGA TCTGCCGTCG CGGCGGCATC GAGAAGCTGG ACATCGGCGC CATCAAGATC
TCGGACACGA CGACCGAGTT CGAGATCGCC GCGCGCGTGG CCGACGCCTT CGCGGCCAAC
ATCCGCCGGC CCGACAAGGA GGATACGATC CGCATCGAGC CGCTCGCTGC CGCACCGTCG
GGGCAGGGGG CATCGGAAAA GCCGCGTCCG GACAAGCGGC CGCGCCGCGC AGCCGAGGAG
AGCGCGTACC ACCCGCTGCG ACGCGATGAG CCGCGCAGCG GCAACGATGC CAAGCCCCGC
GGCAAGCCGC ATCGCGACGG TCCCTCGAAA AAATTCGGAG ACGAACCGGC CTTCGCGAAG
AAAAAGCCGC ATCGCGAGAA GTCCAGCCGC AGCGGACAGA CGTTCCAGTC CCACAGTGCG
CGGTCGAAGG CGCCGGTTGG CAAGAAGCCT AAGGACAAGC GCCGCGGTTG A
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| Protein sequence | MSFPATVPPL ARALAERNYE QPTPVQLAVL DDEAVDRDLL VSAQTGSGKT VAYGLAMATN
LLGDAERFER ASAPLALIVA PTRELALQVQ RELAWLYQHA GARVVSCVGG MDPRREQREL
EAGAHIVVGT PGRLCDHLRR GRLDISDLRA VVLDEADEML NLGFREDMEF ILKTTPETRR
TLLFSATFPR GIVALAKQYQ DDAFRIEVEG DEGGHADIEY RAVRIAPGDA EHAVVNLLRF
YESPSAIVFC NTREAVRHLQ AALLERGFSV VALSGELTQN ERTLALQSLR DGRSRVCVAT
DVAARGIDLA NLDLVIHAEL PNDPEVMQHR SGRTGRAGRK GVSVLLVPPA RRRRAETLLN
LAGIEAVWGT APQADEIRRL DHERMLHDPV LSEETTAEDQ ALAQALLAER SPEEIAAALA
RLYRARLPPP EDILDPAEER GRGRHERDRD NGRPGRGEER PPPVPRTKTG KPSARHGMGE
PSVWFRAAIG RKKNAEARWL LPMICRRGGI EKLDIGAIKI SDTTTEFEIA ARVADAFAAN
IRRPDKEDTI RIEPLAAAPS GQGASEKPRP DKRPRRAAEE SAYHPLRRDE PRSGNDAKPR
GKPHRDGPSK KFGDEPAFAK KKPHREKSSR SGQTFQSHSA RSKAPVGKKP KDKRRG
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