| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4888 |
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| Symbol | |
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| ID | 5150315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5128227 |
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| End bp | 5129225 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640559685 |
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| Product | putative ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001240816 |
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| Protein GI | 148256231 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.962716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.144986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTGA AATGGCTTGC AAGCGCCGCG CTGCTGCTGA GCGTGGTCGC GTCGACTCCT
TCTTACGCCG AGGGACGGAT TCGAATCGTC GAGCAGTTCG GCACCGTCTA TCTGCCGCTG
CACGTGCTGC GCGACCAGAA GCTGATCGAG AAGCATGGCC AGAAGGCCGG CCTCGAGATC
AAGGTCGAAT GGACCAAGCT GAGCGGCGGC GCCGCCATCA ATGACGCCCT CATCTCCGGT
GCCGTCGACA TCGGCGCAGC CGGCGCAGGC CCCGTGCTTG TGCTGTGGGA CCGCACCCGC
GGATCGGCCG ACGTCAAGAT CATCGCCGCA CTCGGCGAGC AGCCGAACTA CCTCATCACC
AGCAATCCCA ATGTCAAGAC GTTGAAGGAC TTCACCAAGA CCGACAAGAT CGCGGTGCCG
GCGGTGGTCG TATCGCAGCA GTCGCGCCTG CTGCAGATCG CGGCGGAAAA GGAGTTCGGT
GAGAGAAAAT TCAACGCGCT CGACGATCTC ACCGTCAACC TGCCGCATCC CGATGCGACG
GCCGCCCTGC TGTCGGGGTC GTCGACCATC ACCGCGCATT TCTCCAATCC GCCCTATCAG
GAGCAGGCGC TGCAGGATCC GAAGATCCAC AAGGTGCTGA GCTCCTACGA CATCATGGGC
GGCCGCATCA CGCCGACGCT GCTCTATGCC ACCTCGAAGT TTCGCAACGA GAATCCGCGG
ACGTTCAAGG TGTTCTACGA CGCGCTGAAC GAGGCCTCAC ATTGGATCGA GAGCCACAAG
GCGGAGGCCG CCGAGACCTA TATCCGCATC GAGCAGTCCA AGCTCGACCC GGCCTTCGTC
AAATCGGTCA TCGATAGCCC CGAGGTCAGC TTCACGACGG TCCCTAAAGG CACGTTCAAA
TACGCCGCGT TCCTCGCCAA GATCGGCGCC ATCAAGACCA GGCCCGCGAG CTGGAAGGAC
TACACGTTCG AAGAGCTGCA CGACAAGCAG GGCGACTGA
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| Protein sequence | MIVKWLASAA LLLSVVASTP SYAEGRIRIV EQFGTVYLPL HVLRDQKLIE KHGQKAGLEI
KVEWTKLSGG AAINDALISG AVDIGAAGAG PVLVLWDRTR GSADVKIIAA LGEQPNYLIT
SNPNVKTLKD FTKTDKIAVP AVVVSQQSRL LQIAAEKEFG ERKFNALDDL TVNLPHPDAT
AALLSGSSTI TAHFSNPPYQ EQALQDPKIH KVLSSYDIMG GRITPTLLYA TSKFRNENPR
TFKVFYDALN EASHWIESHK AEAAETYIRI EQSKLDPAFV KSVIDSPEVS FTTVPKGTFK
YAAFLAKIGA IKTRPASWKD YTFEELHDKQ GD
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