Gene BBta_4887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4887 
Symbol 
ID5155897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5127531 
End bp5128070 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content71% 
IMG OID640559684 
Productputative cytochrome c region protein 
Protein accessionYP_001240815 
Protein GI148256230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.362181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTA GATCCATCGC GGCAGCGGCG GCGCTGATCG TCGTCTGCTC CGTCGCGGGC 
GTCGCCGCGG AGCGCACCAA TCTCGGCCGC GCCGTCACCG CCGACGAGAT CGCCGCCTGG
AACATCGACG TCTCCGGCGA CGGCGCCGGC CTGCCCGCCG GCCGCGGCAG CGTCGCCGAG
GGCCGCGCAT TGTTCGCGGA GGCGTGCGCG GCGTGCCATG GCGACAAGGG CCAGGGCGGC
GCAGCCGATG CACTGGTCGG CGGCCGCGGC ACGCTGGCCA CCGCCAAGCC GGTCAAGACC
ATCGGCAGCT TCTGGCCCTA TGCGCCGACC GTGTTCGACT ACGTCAACCG CGCGATGCCG
TTCAACGCGC CGCAATCGCT GACGCCGGAC CAGGTCTACG CGGTCACCGC CTATCTGCTG
TTCCTGAACG GCATCGTGTC CGAGGATACC ACGCTCGATG CCGCGTCCCT GGCGAAGGTC
GAGATGCCCA ACCGCAACGG CTTCACCCGG GATCCGCGTC CCGACGTGCC GCCGAAATGA
 
Protein sequence
MSFRSIAAAA ALIVVCSVAG VAAERTNLGR AVTADEIAAW NIDVSGDGAG LPAGRGSVAE 
GRALFAEACA ACHGDKGQGG AADALVGGRG TLATAKPVKT IGSFWPYAPT VFDYVNRAMP
FNAPQSLTPD QVYAVTAYLL FLNGIVSEDT TLDAASLAKV EMPNRNGFTR DPRPDVPPK