Gene BBta_4886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4886 
Symbol 
ID5155896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5126312 
End bp5127541 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content67% 
IMG OID640559683 
Productputative sulfite oxidase (soxC) 
Protein accessionYP_001240814 
Protein GI148256229 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.592405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTCA GTCCGGACCG GAGATCGTTG CTGGGCGGTC TTGCCGCTGC CGCGGGCGGA 
TGGATCGGCA CGGCGGGTGC CGCAGAAGGC CGGCTGCAGG TGCCGGTCTG GACGCGCCAG
CAAGGATCGC CGGTGGCGAG CCCGGCCTAT GGTGTGCCCT CGCGGTTCGA GGACGGCATC
AAGCGCCGCC CGCGCACGCC GCCGCCGATT CCGACGGCGG CCTCCAGCGG CACGCCGCTG
CAGCATCTCC ACGGCATCAT CACCCCGGCC GGCCTGCATT ACGAGCGCCA CCATGCCGGC
GTGCCCGACA TCGATCCCGA TCAGCACCGG CTGGTCGTGC ATGGCTTGGT CGAGCGCCCG
CTGGCGTTCA CGATGGATGA CCTGCTGCGG TTTCCCTCGG TCTCGCGCAT TCATTTCATG
GAGTGCTCGG GTAACACCTC GACCTGGGGC GGCGGCAATC CGAAATGGAC CGTGCAGGAC
ACCCATGGCC TGATCAGCTG CAGCGAATGG ACCGGCGTGC CACTCGCGAC CGTGCTGCAG
GAAGTGGGCG TCAAGCCGGA GGGCCGCTGG ATCCTCGCGG AAGGCGCCGA TGCGGCGGCG
ATGACGCGCA GCGTGCCGAT CGAGATCGCG CTCGACGACG CCATTCTCGC TTATGCGCAG
AACGGTGAGC GGCTGCGGCC CGAGCAGGGC TATCCGCTGC GCCTATTCCT GCCCGGCCTC
GAAGGCAATC TCAGCGTCAA ATGGCTGCGA CGGCTCAAGG TCGGCGACAA ACCGTTCCAG
TCACGCGAGG AGACCTCGAA ATACACCGAC CTGATGCCGG ACGGCACTGC ACGGCAGTTC
ACCTTCACGA TGGAGGCGAA ATCCGTGATC ACGCAGCCTT CCTCCGGGCA TCAGCTGCGC
GAGCGCGGCC TCTACGAGAT CCGTGGGCTG GCCTGGTCGG GACGCGGCAG CATCAGCAAG
GTCGAGGTCT CCACCGACGG CGGCCAGACC TGGCGCGAGG CCGAGCTGCA GCAGCCAGTG
CTGTCGAAAT GCCTGACGCG CTTCCGGCTG CCATGGCAAT GGGATGGCGG ACCGGCGCTG
CTGCAGAGCC GCGCCACCGA TTCCACCGGC TATCTGCAGC CGACCAAGGA GCAGCTGATC
CGCGCCCGTG GGCTGAACTC CAACTATCAC TTCAATGCGG TCTATGGCTG GCAGCTCAAT
GCCGAGGGAG CGGTCACCCA TGTCGTTTAG
 
Protein sequence
MVFSPDRRSL LGGLAAAAGG WIGTAGAAEG RLQVPVWTRQ QGSPVASPAY GVPSRFEDGI 
KRRPRTPPPI PTAASSGTPL QHLHGIITPA GLHYERHHAG VPDIDPDQHR LVVHGLVERP
LAFTMDDLLR FPSVSRIHFM ECSGNTSTWG GGNPKWTVQD THGLISCSEW TGVPLATVLQ
EVGVKPEGRW ILAEGADAAA MTRSVPIEIA LDDAILAYAQ NGERLRPEQG YPLRLFLPGL
EGNLSVKWLR RLKVGDKPFQ SREETSKYTD LMPDGTARQF TFTMEAKSVI TQPSSGHQLR
ERGLYEIRGL AWSGRGSISK VEVSTDGGQT WREAELQQPV LSKCLTRFRL PWQWDGGPAL
LQSRATDSTG YLQPTKEQLI RARGLNSNYH FNAVYGWQLN AEGAVTHVV