| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4864 |
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| Symbol | oppF |
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| ID | 5154566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5107808 |
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| End bp | 5108758 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640559662 |
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| Product | oligopeptide ABC transporter ATP-binding protein |
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| Protein accession | YP_001240793 |
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| Protein GI | 148256208 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.671613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCTGC TGTCCGTCTC TGACCTCACC ACCACCTACA CCTCAGGCCG CAGCGCCGTG
CATGCCGTCG ATGGCGTGTC GCTCGAGATC GCGCGCGGCG AGACGATCGG CCTGGTCGGC
GAATCCGGCT GCGGCAAGTC CACGCTCGGC AAGACGATCC TGCGGCTTGT CGAGCCGTCG
GGCGGCCGCA TCCTGTTCGA CGGCGAGGAC CTCACCGCGC TTTCGGAAGC CGCGCTGCGC
AGCCGGCGCA AGCGGCTGCA GATGGTGTTC CAGGATCCGT TCGCCTCGCT CAATCCGCGC
CAGACCATCG GCGAGATCCT CAGCGCGCCG CTCGCTGTCC ATGGCGTCAA ATCGCGCGCG
GAACGGCAGC GCCGCGTCGA CGACATCCTG GCGCGCGTCG GCCTGCCGCC GGACAGCGCG
CGACGCTATC CGCACGAATT CTCCGGCGGC CAGCGCCAGC GCATCGGCAT CGCCCGCGCG
CTGATCCTGG AGCCCGACCT CATCATCTGC GACGAGCCGG TGTCGGCGCT CGATCTCTCG
GTGCAGGCGC AGATCCTCAA CCTGCTCGCC GAGCTGAAGC AGAGTCTCAA TCTGTCGCTG
CTGTTCATCT CGCACGATCT GTCCGTCGTC CGCTATCTCT CCGACCGCGT GCTGGTGATG
TATCTCGGCC GCATCGTCGA GAGCGGCAGC CACACGCAGA TCTGGCACCG GCCGCTGCAT
CCCTACACCA AGGCGCTGAT CGACGCGGTG CCCGACCCAA CCCGCCGCCG CTATGCCGCG
CCGCTGCCGG GCGACCTGCC CGACCCCCGC AGCGTCGGCG GCGGCTGCCG CTTTGCGCCG
CGCTGCCCGA TCGCAACCGA GATCTGTAGG ACGCAGGACC CGGCGCTGCG CGCCGCCGCA
GCGGGCCATC ACGTCGCCTG CCATCATGCG GAGCCGGCCC TGGTCTCCTG A
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| Protein sequence | MTLLSVSDLT TTYTSGRSAV HAVDGVSLEI ARGETIGLVG ESGCGKSTLG KTILRLVEPS
GGRILFDGED LTALSEAALR SRRKRLQMVF QDPFASLNPR QTIGEILSAP LAVHGVKSRA
ERQRRVDDIL ARVGLPPDSA RRYPHEFSGG QRQRIGIARA LILEPDLIIC DEPVSALDLS
VQAQILNLLA ELKQSLNLSL LFISHDLSVV RYLSDRVLVM YLGRIVESGS HTQIWHRPLH
PYTKALIDAV PDPTRRRYAA PLPGDLPDPR SVGGGCRFAP RCPIATEICR TQDPALRAAA
AGHHVACHHA EPALVS
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