| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4845 |
|---|
| Symbol | |
|---|
| ID | 5154716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5084887 |
|---|
| End bp | 5085693 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640559643 |
|---|
| Product | putative D-methionine-binding lipoprotein precursor |
|---|
| Protein accession | YP_001240774 |
|---|
| Protein GI | 148256189 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.768272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.268623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGT TGTTGCGCGT GGCGCTCGCC TTGGGCCTCG TATCCGGACT TTCAGTGGCA
GGTCGCGCTG ATGAGCCGCT CAAGATCTCG ACCAGCGCCG GCCCGATCGG GCAGCTCGTC
GGCTTCGCCG CCAAGCTCGC CAAGGAAAAG GGCCAGGACG TCAAGGTCGT CGAGCTGTCC
GATTGGGTCG CGATCAACGA GGTTGTCAAT TCGGGTGACG TCGATGCCAA TCTGTTCCAG
CACGCCACCT ATCTCGCCCT GCAGAACAAG CAGCGCGGCT ATAATTTCGT GCAGGTCGAC
AAGGTCGGCG TGATCGCGCC GGTCGGGCTG TTCTCGAAGA AGATCAAGGC GCTCGACGAG
GTCAAGGAGG GCGCGTCTGT CGCCATCCCC AATGAGCCGC TCAATGGCGC GCGCGGGCTG
ATCCTGCTGG AGCGGGCCGG CCTGATCAAG CTGACGCCGG GCAAGGGGTT CTCGGTCTCG
AAATTCGACA TCATCGAGAA CCCGAAGAAT CTGAAGATCG TCGAGCTCGA TCCCGCGCAG
ACCTACCGCT CGCTCGACGA CGTCACGCTC GCTTTGGTCA ACATCACCTA TCTGATCCCG
GCCGGCGGCG ATCCGAAATC CGCACTTATC ATCGACCGGA CGATCGACGA TGGCCTGGTG
CTGCGCTTCA CCGCGCGCGC CGACAAGAAG GACAATCCGA AGCTGAAGGC CTTTATCGAG
GTCTTCAAGT CGCCGGAGGT CAAGCAGTTC ATCGAGGAGA AGCTGCCGGC GTTCATTCCG
GCCGGCTTCG ACACCAAGGC GTCCTGA
|
|---|
| Protein sequence | MKMLLRVALA LGLVSGLSVA GRADEPLKIS TSAGPIGQLV GFAAKLAKEK GQDVKVVELS
DWVAINEVVN SGDVDANLFQ HATYLALQNK QRGYNFVQVD KVGVIAPVGL FSKKIKALDE
VKEGASVAIP NEPLNGARGL ILLERAGLIK LTPGKGFSVS KFDIIENPKN LKIVELDPAQ
TYRSLDDVTL ALVNITYLIP AGGDPKSALI IDRTIDDGLV LRFTARADKK DNPKLKAFIE
VFKSPEVKQF IEEKLPAFIP AGFDTKAS
|
|---|
| |