| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4829 |
|---|
| Symbol | |
|---|
| ID | 5155798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5067160 |
|---|
| End bp | 5068179 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640559628 |
|---|
| Product | putative ABC transporter (ribose binding protein) |
|---|
| Protein accession | YP_001240759 |
|---|
| Protein GI | 148256174 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGTT TGGCCCTTGC GGCCACTGCG TTCGTCGGAA TTGCTGCGGC CGCCATCGGT
GCCGCCCGCG CCGACGACAT GAACGATCCC TATCGGCAGC CGGCGCTCGA CGCGCTCAAG
GGCAAGTCGA TCGTCTATCT GCCGATCTCG ATCGGCTTCG ACCTGGCGCA GGCCTGGGGC
GGCGTCGTTA AGACCGAAGC CGAGCGTTAC GGCATGAAGT TCAAGTCGCA GGATCCGAAC
TGGAACACCG GCGCGATGGC GCAGGGCCTG ACCTCGCTGA TCGCCGAGAA GCCCGACGTG
ATCGTGACGC AGAACCCGGA CCTGCAATCG CTGGCGCGGC TGCTCAAGCA GGCCAATGCC
GCCGGCATCG TCGTGATCCA GATGAACATG CAGGGCGCGG TGCAGACCGA CGCTTTCGTC
GGCCCCGACT TCATCGCCAT GGGCGAGCAG GCAGCCAAGA TGGTCGTCGC CAAATGCGGC
AAGGGCACCG AGACCTCGCA CAAGGTCTCG ATCGTGCAGG GCGTGCTCAC CGGCGGCGTC
AGCTACTACC AGGTTCAGGG CATCAAGAAG GTGTTCGAGG CCAACCCCGA GATCAAGGTG
GTGTCGAGCC AGGCGGCCGA TTGGGACGCC TCCAAGGCGC GCGCCATCAC TGAGACGGTG
CTGCAGCAAA ATCCGGATCT GTGCGGCGTC ATCGACGTCT GGGATGGCCA GGGCGTTGGC
ACGGGGGCCG CGATCAAGCA GGCCGGCAAG CAGGACCAGG TCTATTTCGT CACCTCGGGC
GGCGGCGCGC AGAGCATGTG CGACCGGCTT GCCGACGGCA CCTTCTCGGC CGCGATCAAT
TATGACGCGC CGGGCATGGG CCGCGACGCC TTCACCGCGA TCTCCGCGGT GCTGCAGGCC
AAGCAGAAGG CCGGCACGAT GAAGTTCCAG CTCTATTCGC CCACGCGCGT CATGACCAAG
GCCGACGTCA AGGCCGGCAC CTGCTGGGAT CCCGAGCAGT ACGCCAAGCT GCTGCGCTGA
|
|---|
| Protein sequence | MHRLALAATA FVGIAAAAIG AARADDMNDP YRQPALDALK GKSIVYLPIS IGFDLAQAWG
GVVKTEAERY GMKFKSQDPN WNTGAMAQGL TSLIAEKPDV IVTQNPDLQS LARLLKQANA
AGIVVIQMNM QGAVQTDAFV GPDFIAMGEQ AAKMVVAKCG KGTETSHKVS IVQGVLTGGV
SYYQVQGIKK VFEANPEIKV VSSQAADWDA SKARAITETV LQQNPDLCGV IDVWDGQGVG
TGAAIKQAGK QDQVYFVTSG GGAQSMCDRL ADGTFSAAIN YDAPGMGRDA FTAISAVLQA
KQKAGTMKFQ LYSPTRVMTK ADVKAGTCWD PEQYAKLLR
|
|---|
| |