| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4820 |
|---|
| Symbol | |
|---|
| ID | 5155049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5054870 |
|---|
| End bp | 5055694 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640559619 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001240750 |
|---|
| Protein GI | 148256165 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGGG CTCTCGCCGT CTTTCATGCT CGCTTTGGTC GCGCAACGGT TTATCAGCTC
AATCGGCCGT TCAATGTGCA TGCCCATCGT GAAGGGCATC TGATCTTCCA CGTTGGCGGC
ACGCCGGCCG ACATCGATGT CTGCGAGCAG CGCTATCAGA TCGGTGAAGA TTGGATCGTC
GCGGTCAACC CCTGGGAACC GCATAATTTC CTGCCTAACG ACGTCGACAA TGGCGCGATC
TTCTTTGTGC TCTATGTCAA CGCCGACTGG TTTGCGCCCT CGGCCGCCCG CGAGCAGGGC
CTCCGCTTCG GCCGAACCTG TTTTAGGCGC ACGGCGGCGC TGGACCGCTG CATCCGCCGC
ACCGCAGCGT TGGTATGTGG CGCGCCATCG CTCGGCTGTC TCGACGGCGA GCTGCGACAG
CTGATCGATA GCTGCTATGA GGAGAGCTGG CGGATCGTCG AACTGATGCC GGAGCGGCGC
TGCGCCGAGG TGACTGATTT CCGTGTTCGC AAATGCATCA AGCTGATGTC CGACAGCCCC
TGCGCGGAGA TCGAGCTCGA TGACATCGCG CGCGAGTCCG GACTGTCGCG GCCGCATTTC
TATCGTCTGT TCCGTAGCCA GACCGGCGTG ACCCCGAACC TCTATCTCAA CACGCTGTTG
ATGGAGCGGG CGTTGGATGC GCTTGTGGCG ACGGAGTCGC CGATCGCCGA CATCGGCTTC
GATCTCGGCT TTTCCTCGCA GAGCGGCTTC ACGCGCTTCT TTGCCGGCAA TGTCGGCATG
GCGCCGACCG ACTATCGCCG CGCTGCAAAA GTGCTGCGCG CCTGA
|
|---|
| Protein sequence | MSRALAVFHA RFGRATVYQL NRPFNVHAHR EGHLIFHVGG TPADIDVCEQ RYQIGEDWIV
AVNPWEPHNF LPNDVDNGAI FFVLYVNADW FAPSAAREQG LRFGRTCFRR TAALDRCIRR
TAALVCGAPS LGCLDGELRQ LIDSCYEESW RIVELMPERR CAEVTDFRVR KCIKLMSDSP
CAEIELDDIA RESGLSRPHF YRLFRSQTGV TPNLYLNTLL MERALDALVA TESPIADIGF
DLGFSSQSGF TRFFAGNVGM APTDYRRAAK VLRA
|
|---|
| |