Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4799 |
Symbol | |
ID | 5154270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5024087 |
End bp | 5026690 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559598 |
Product | hypothetical protein |
Protein accession | YP_001240729 |
Protein GI | 148256144 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGATC AAACCAAAGC GCAAGCTGGC GATCAGCCCG CTTCGCGGCA CAAGGGCTTC GCCGGCGCCC TGACGAGAGC AGAGGCTCGG CTTGGCTTGA ACCGGCGCTG GACGCCGCGG ATCATCATCC TGAGCGGCCT CGTGCTGGCG GTTCTGTGCG ATGCCTTCGT CGCGCACATG CTCTCCGTCA ACTATCGGGA GACGTATCGG ACCATCAAGG CCGCGAATGG CGATCTGGCC CGCGCTCTCG AAGAATACAT GTTGCGCAAC ATCCAGGGCG TCGATGTCCT CTTGAGCGGG ACGATCAATA ATCTGGCGAA GAACCCGGCG CTGCTGACCG CCGGCAACCC GGCCCTGATC GACGAACTGA AGCAGCGGGT CGCGCCATAT CCGATCGCGA ATGCGATCGT CGTTCTCGAC GCCGATGGAA AGCTGCTGGG CGACAGCCTC GGGAATGGCG GCCCGGGCCG GGAGCAGAAT TTTGCCGATC GGACGTACTA CAAGGCCCAG CGGGATGACC CCGGCCGCGG CCTGTTCATC GACGTGCCGG TGTTCTCCCG CGTTCGCAAC AGCCTCGTCC TCGTAGTCAG CCGCGCATTC CTGACGCCGG AGGGGCGTTT CGGCGGCATC GTCTTCGTGC CCATCGACTA TGAGAATCTC CGGCAGTTCT TCCTGTCGCT GAACGTCGGC CAGCGCGGCA CCGTGACGCT CTACCGTGAC GACGGCACGA TCCTGCTGCG CACGCCGAAT GCCGACGAGT TTGCCGGGCG CGATGTCCGC TCGAACCGCC TGTTCACCTA CTATCTGCCA CAGGCGCAAA GCGGAAGCTT CGAAGGAAGC GGCATGACGG ACGGCACGTC CCGGAGCATC AGCTACCGGC GTGTCGCAGG CATGCCGCTG GTGGTGACGA TCGCCCGCGA CCCGGTCGAG TTTCTGGCGG GCTGGAAGAA CAATGCGCTG TATTACAGCG TCATCGCGGC CGGGCTCAAT CTGCTGATCG CGGGGTTCGG CTTCGGCCTG GCGCGGCAAT GGCGTTTGCG CGCCACGTCG GAACAGGCAT TGCGGGACAA TCTGGAGCAG CATCAGCTGG TCACGGAAAA CGTGCCGGCC TTGATCGTCC ATGTCCTGGA GGATGGCCGC ATCCGCTATG CCAACCGGGT CGCACGCGAC TGGTATGCCG CGCCGTCCAC CGACACGATC TGCGGCCGCA AGATCGAGGA TTTCATCGAT CCCTCGCATC TGGACGAGGC GAGAGCGAAG ATCGAGGCCG CGCTGGCCGG CCGAACCACG GGGGGCGAGG AGGAGACGAC ATTTCCCGAC GGCCGTGAAC GCTGGTGCGA GACCATCCGG GTGCCGGATT GCCGCCAGGA TGGCACGGTG CGCGGCTATT TCGTGCTGTC GGTCGACATC ACCGAGCGCA AGCGGATCGA GGACGAGTTG CGTCAGGCGC AGAAGATGGA GGCGATCGGA CAACTCGCCG GAGGCATCGC GCATGACTCC AACAACATGC TCGCGGCGAC GCTCGGCAAT CTCGATCTCC TGCTCGATGC GCTGCCTCAG GCCGAGGTCT CCGCCCGCAG CCTGGCCGAG CGCGCCGCCG AAGCGGCGGA GCGGGTCGCC GATCTCAATC GCCGTCTGCT GGCATTTGCG CGTAAGCAGA CGCTGCGGCC GCAGGTCACC GACGTCAACC AGCTGGTCTG CGCGATGACG ACGATCCTGC AGCGGACGCT CGGAGAGACC ATCGAGATCG AGGTCGCGCA GGACCCGATG CTGTGGCAGT GCCTGATCGA TCCGACGCAA TTGCAGAACG CGCTGCTCAA TCTGGCGCTG AATGCGCGGG ATGCGATGGC CGGCCAGGGA CGACTGACGA TCACGACCGC AAATGCCGTG CTCGATCAGC CGCTCGATGA CGGCGACGAG CGCATCGGCC CCGGCGAATA CGTGACCATT GCGGTGGCCG ACAGGGGCGC CGGGATGCCG CCCGAGATCG CGCGCCGCGC CTTCGAGCCG TTCTTCACCA CCAAGGAGTT CGGCAAGGGC AGCGGACTTG GGCTGTCGAT GGTCTATGGC TTCGCCCGGC AGTCGGGCGG CACCGCAGTG ATCGCGAGCC AGGTCGGGCA GGGCACACAG GTCACGCTCT ACCTGCCGAG CGCCGGGCCA GGAGCGAGCG GGGAGGCGCG CGCCGGCACG ACGCGGCTGC CGCGGCCCGA CCGCGCCGAG CGGATCCTGG TGGTGGAGGA CAATCCGCTG GTCGGCGCGA TGGCCTCCAC CATGCTATCG TCGATGGGCT ACAGTCCGGT CGTCGTCGTC AATGCGGCCG CGGCGATCGC CGAATTGGAG CGGCCGGAGC CGGTCGCGTT GCTGCTGACC GACATCGTCC TGCCGGATGG GGTGACCGGC ATCGACCTCG CGCGCCAGGT CCGCCACAGA TGGCCGGAAC TGCCCATTGT CTTCATGTCC GGTTTCGCGG ACCCCTCGCT CGTCCCCGAA GATTTCAGGG CCACGACCAA GCTTCTCGCC AAGCCGTTCC GGCTCGGGCA ATTGTCGGAG GCGATCGTGT CGTCCCTGGC GGGCCGGCCG GCCGCTGGCA GAACCGCGAC ATGA
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Protein sequence | MLDQTKAQAG DQPASRHKGF AGALTRAEAR LGLNRRWTPR IIILSGLVLA VLCDAFVAHM LSVNYRETYR TIKAANGDLA RALEEYMLRN IQGVDVLLSG TINNLAKNPA LLTAGNPALI DELKQRVAPY PIANAIVVLD ADGKLLGDSL GNGGPGREQN FADRTYYKAQ RDDPGRGLFI DVPVFSRVRN SLVLVVSRAF LTPEGRFGGI VFVPIDYENL RQFFLSLNVG QRGTVTLYRD DGTILLRTPN ADEFAGRDVR SNRLFTYYLP QAQSGSFEGS GMTDGTSRSI SYRRVAGMPL VVTIARDPVE FLAGWKNNAL YYSVIAAGLN LLIAGFGFGL ARQWRLRATS EQALRDNLEQ HQLVTENVPA LIVHVLEDGR IRYANRVARD WYAAPSTDTI CGRKIEDFID PSHLDEARAK IEAALAGRTT GGEEETTFPD GRERWCETIR VPDCRQDGTV RGYFVLSVDI TERKRIEDEL RQAQKMEAIG QLAGGIAHDS NNMLAATLGN LDLLLDALPQ AEVSARSLAE RAAEAAERVA DLNRRLLAFA RKQTLRPQVT DVNQLVCAMT TILQRTLGET IEIEVAQDPM LWQCLIDPTQ LQNALLNLAL NARDAMAGQG RLTITTANAV LDQPLDDGDE RIGPGEYVTI AVADRGAGMP PEIARRAFEP FFTTKEFGKG SGLGLSMVYG FARQSGGTAV IASQVGQGTQ VTLYLPSAGP GASGEARAGT TRLPRPDRAE RILVVEDNPL VGAMASTMLS SMGYSPVVVV NAAAAIAELE RPEPVALLLT DIVLPDGVTG IDLARQVRHR WPELPIVFMS GFADPSLVPE DFRATTKLLA KPFRLGQLSE AIVSSLAGRP AAGRTAT
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