| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4783 |
|---|
| Symbol | panC |
|---|
| ID | 5155753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5009375 |
|---|
| End bp | 5010226 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640559582 |
|---|
| Product | pantoate--beta-alanine ligase |
|---|
| Protein accession | YP_001240713 |
|---|
| Protein GI | 148256128 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGAA CACCACGCGT CGCCCGCAGT CTTTCCGCGC TTCGCCGCGA GCTCGACAGC
CTGCGCGCGA GAAAGGCCAC CGTTGCGCTC GTGCCCACCA TGGGTGCCTT GCATGACGGC
CACATCTCGC TCGTGCGACA GGCGAAGCGC CGCGCCGACA AGGTCGTCGT CTCGATCTTC
GTCAATCCGA CTCAATTCGC GCCGACGGAG GATTTCGGTT CCTATCCGCG CACCTGGAAG
GAGGATGTTG CCAAGCTCGC GGCCGAGCGC GTCGATCTGA TCTGGCACCC TGACGCCAAG
GCGATGTATC CGGATGGCTT CACGACCCGG ATCGTGCCGG AAGGCCCAGC CTTGGCCGGA
CTCGAGGATC GCTTTCGCCC TCACTTCTTC GGCGGCGTTG CAACCGTGGT GGCGAAGCTG
TTCGCACAGT GCCGTCCCGA TGTCGCGATC TTCGGCGAGA AGGACTATCA GCAGCTCCGT
GTGGTGACGC AGATGGCGCG CGATCTCGAC CTCGGCGTTC GCGTCGTCGG GTCGCGTACG
GTGCGCGAAC GCGACGGGCT CGCGATGTCG TCGCGCAATG TCTATCTCAG TGCAGACGAA
CGCCGCGTTG CGCCGACACT GCACCGTGCA CTGAAGGAGC TCGCGAGCCG GCTGCGCGCC
GGCGGCGACA TGCAGGACGC CCTTCGTGAC GGCAACGCCA CAATTACCCA AGCCGGCTTC
GACTTGGATT ATCTTGAGGT GCGCCACGCC GAGACGCTGG CCCCTGTCAC ACAGGACGAG
TCCGGGCCGA AGCGCATCCT GGTCGCCGCC CGGATTGGAA CGACGCGGCT CATCGACAAC
ATCGCGGTGT AG
|
|---|
| Protein sequence | MSRTPRVARS LSALRRELDS LRARKATVAL VPTMGALHDG HISLVRQAKR RADKVVVSIF
VNPTQFAPTE DFGSYPRTWK EDVAKLAAER VDLIWHPDAK AMYPDGFTTR IVPEGPALAG
LEDRFRPHFF GGVATVVAKL FAQCRPDVAI FGEKDYQQLR VVTQMARDLD LGVRVVGSRT
VRERDGLAMS SRNVYLSADE RRVAPTLHRA LKELASRLRA GGDMQDALRD GNATITQAGF
DLDYLEVRHA ETLAPVTQDE SGPKRILVAA RIGTTRLIDN IAV
|
|---|
| |