| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4772 |
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| Symbol | clpA |
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| ID | 5154150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4996811 |
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| End bp | 4999201 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640559573 |
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| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
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| Protein accession | YP_001240704 |
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| Protein GI | 148256119 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACTT TTTCTCAAAG CCTTGAACAA TCCCTGCATC GTGCGCTGGC GATTGCCAAC
GAGCGTCATC ATCAATACGC GACACTGGAG CATCTCCTGC TGTCCTTGAT CGATGACAGC
GATGCAGCGG CCGTGATGCG CGCATGCAGC GTCGATCTCG ACAAGCTGCG CGGCAGTCTC
GTGAATTATC TCGAAACCGA GTTCGAAAAC CTGGTTACCG ACGGCAGCGA TGACGCCAAG
CCGACCGCGG GTTTCCAGCG TGTGATCCAG CGCGCCGTGA TTCACGTCCA GTCGTCCGGC
CGCGAAGAGG TGACCGGCGC CAACGTGCTG ATCGCGATCT TTGCCGAGCG CGAGAGCCAC
GCCGCCTATT TCCTGCAAGA GCAGGACATG ACGCGCTACG ACGCCGTGAA CTACATCAGC
CACGGCATCG CCAAACGCCC TGGAGTCTCC GAAGCCCGCC CGGTGCGCGG CGTCGACGAG
GAGACCGAGA CCAAGGGCAA CGAGGACTCG AAGAAAAAGG GCGAGGCGCT GGAAACCTAT
TGCGTCAATC TCAACAAGAA AGCTCGCGAC GGCAAAATCG ATCCGGTGAT CGGCCGTAAC
TCCGAGATCA ATCGCGCCAT CCAGGTGCTG TGCCGCCGCC AGAAGAACAA TCCGTTGTTC
GTCGGCGAGG CCGGCGTCGG CAAGACCGCG ATCGCGGAAG GTCTGGCCAA GCGCATCGTC
GACAGCGATG TGCCGGAGGT GCTGTCCGCA GCGACCGTGT TCTCGCTGGA CATGGGCACG
CTGCTTGCGG GCACGCGCTA TCGCGGCGAC TTCGAGGAGC GCCTGAAGCA GGTCCTCAAG
GAGCTCGAGG CGCATCCGAA CGCGATCCTG TTCATCGACG AGATCCACAC CGTGATCGGT
GCCGGCGCGA CGTCGGGGGG CGCGATGGAC GCGTCGAACC TGCTCAAGCC TGCGCTGGCC
TCGGGCTCGA TCCGCTGCAT GGGTTCCACG ACCTACAAGG AGTACCGACA GCATTTCGAG
AAGGATCGCG CGCTGGTGCG GCGCTTCCAG AAGATCGACG TCAACGAGCC GTCCGTCGAG
GATGCGATCG CGATCCTCAA GGGCCTGAAG CCCTATTTCG AGGATTATCA CCGGCTGAAA
TACACCAACG AGGCCATTGA GGCCGCGGTG CAGCTGTCGT CGCGCTACAT CCATGACCGC
AAGCTGCCGG ACAAGGCGAT CGACGTGATC GACGAATCCG GCGCGGCGCA GATGCTGCTG
GCCGAGAACA AGCGCAAGAA GACGATCGGC ATCAAGGAGA TCGAGACCAC GATCGCGACC
ATGGCGCGGA TCCCGCCCAA GAGCGTGTCG AAGGACGACG CCGAGGTGCT CAAGCATCTC
GAGCAGACCC TGAAGCGCGT GGTGTTCGGT CAGGACAAGG CGATCGACTC GTTGTCGGCC
TCGATCAAGC TGGCGCGGGC TGGCCTGCGC GAGCCGGAGA AGCCGATCGG CTGCTATCTG
TTCTCGGGCC CGACCGGCGT CGGCAAGACC GAGGTGGCCA AGCAACTCGC GGCGACGCTC
GGTGTGGAAC TCCTGCGCTT CGACATGTCG GAGTATATGG AGCGGCACAC GGTGTCGCGC
CTGATCGGCG CCCCTCCGGG CTATGTCGGC TTCGACCAGG GCGGTCTCCT GACCGATGGC
GTCGACCAGC ATCCGCATTG CGTGGTGTTG CTCGACGAGA TCGAGAAGGC GCATCCGGAT
CTGTACAATG TGCTGTTGCA GATCATGGAC CATGGCCGGC TCACCGACCA CAACGGCAAG
CAGGTCAACT TCCGTAACGT CATCCTGATC ATGACGACGA ATGCCGGCGC GGCCGACCTC
GCCAAACAGG CCTTCGGTTT CCACCGCTCC AAGCGCGAAG GCGACGACCA CGAGGCGATC
AACCGGCAGT TTGCGTCGGA ATTCCGTAAC CGTCTCGATG CGATCGTCTC GTTCGCGCAT
CTGTCGGTCG ACGTGATCGG CATGGTGGTC GAGAAGTTCG TGCTGCAGCT CGAAGCCCAG
CTGGCCGATC GCGACGTCAC GATCGAGCTG TCGGAACCGG CCAAGAGCTG GCTGATCCAG
CACGGTTATG ACGAGCAGAT GGGTGCGCGC CCGATGGGCC GCGTGATCCA GGAGCACATC
AAGAAGCCAT TGGCCGATGA GGTGCTGTTC GGCAAGCTGA AGGGGGGCGG CCACGTCCGT
GTGGTCCTCG TCAAGGACGA GGAAGGCGCC GACGAGAAGA TCGGCTTCGA GTTCGTCGAG
GGGCCGGTCA CGCCGAAGTC GGAAGTGCCG GCGGCGCGCA AGCGCAAGCC GAAATCCGGC
GGTGGCGGCT CGAAAGGCCC GGCCCCGAAG GGACCCCTGG TCAAGGCGTG A
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| Protein sequence | MPTFSQSLEQ SLHRALAIAN ERHHQYATLE HLLLSLIDDS DAAAVMRACS VDLDKLRGSL
VNYLETEFEN LVTDGSDDAK PTAGFQRVIQ RAVIHVQSSG REEVTGANVL IAIFAERESH
AAYFLQEQDM TRYDAVNYIS HGIAKRPGVS EARPVRGVDE ETETKGNEDS KKKGEALETY
CVNLNKKARD GKIDPVIGRN SEINRAIQVL CRRQKNNPLF VGEAGVGKTA IAEGLAKRIV
DSDVPEVLSA ATVFSLDMGT LLAGTRYRGD FEERLKQVLK ELEAHPNAIL FIDEIHTVIG
AGATSGGAMD ASNLLKPALA SGSIRCMGST TYKEYRQHFE KDRALVRRFQ KIDVNEPSVE
DAIAILKGLK PYFEDYHRLK YTNEAIEAAV QLSSRYIHDR KLPDKAIDVI DESGAAQMLL
AENKRKKTIG IKEIETTIAT MARIPPKSVS KDDAEVLKHL EQTLKRVVFG QDKAIDSLSA
SIKLARAGLR EPEKPIGCYL FSGPTGVGKT EVAKQLAATL GVELLRFDMS EYMERHTVSR
LIGAPPGYVG FDQGGLLTDG VDQHPHCVVL LDEIEKAHPD LYNVLLQIMD HGRLTDHNGK
QVNFRNVILI MTTNAGAADL AKQAFGFHRS KREGDDHEAI NRQFASEFRN RLDAIVSFAH
LSVDVIGMVV EKFVLQLEAQ LADRDVTIEL SEPAKSWLIQ HGYDEQMGAR PMGRVIQEHI
KKPLADEVLF GKLKGGGHVR VVLVKDEEGA DEKIGFEFVE GPVTPKSEVP AARKRKPKSG
GGGSKGPAPK GPLVKA
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