| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4766 |
|---|
| Symbol | nitA |
|---|
| ID | 5153646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4991484 |
|---|
| End bp | 4992521 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640559567 |
|---|
| Product | aliphatic nitrilase |
|---|
| Protein accession | YP_001240698 |
|---|
| Protein GI | 148256113 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.440262 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTGG CACATCCGAA ATACAAGGTG GCGGTGGTGC AGGCGGCGCC CGCCTGGCTC
GATCTGGACG CTTCGATCAA GAAGACGATC GCGCTGATCG AGGAGGCTGC GGACAAGGGC
GCCAAGCTGA TCGCATTCCC CGAGGTGTTC ATCCCCGGCT ATCCCTGGCA CATCTGGATG
GACTCGCCGG CCTGGTGCAT CGGACGCGGC TTTGTGCAGC GCTATTTCGA CAATTCGCTG
GCCTATGACA GCCCGCAGGC CGAGGCGTTG CGCGCCGCGG TGCGCAAGGC CCAGTTGACG
GCCGTGCTCG GCCTGTCCGA GCGGGACGGC GGCAGCCTCT ATATCGCCCA ATGGCTGATC
GGAGCGGATG GCGAGACGAT CGCCAAGCGC CGGAAGCTGC GGCCGACCCA TGCCGAGCGC
ACCGTCTATG GCGAAGGCGA CGGCAGCGAC CTCGCAGTCC ATGAGCGCCC GGACATCGGA
CGGATCGGCG CGCTCTGTTG CTGGGAGCAT CTGCAGCCGC TGTCGAAATA CGCGATGTAT
GCGCAGAACG AGCAGGTGCA CGTCGCGGCC TGGCCGAGCT TCTCGCTGTA TGATCCGTTC
GCGCCCGCAC TCGGCGCCGA GGTCAACAAC GCCGCGTCGC GCGTCTATGC GGTGGAGGGC
TCGTGCTTCG TGCTGGCGCC ATGCGCGACG GTCTCGCAGG CCATGATCGA CGAGCTGTGC
GACCGGCCCG ACAAGCACGC GCTGCTGCAT GCCGGCGGCG GCCATGCCGC GATCTTCGGC
CCGGACGGCA GCGCGCTGGC CGCGCAGCTG CCGCCGGATC AGGAAGGTCT GCTGATCGCC
GAGATCGACC TCGGCATGAT CGGCATCGCC AAGAACGCCG CCGATCCGGC CGGGCACTAT
TCGCGTCCGG ACGTGACGCG GCTGCTGCTC AACAAGAAGC CGCTCAACCG CGTCGAGCAT
TTCTCGCTGC CGGTCGACAG CGCCGCCGCG GCATTACCCG GCGAGGCCGC CGTCGCGCGG
CCCGATCAAT CCATCTGA
|
|---|
| Protein sequence | MGLAHPKYKV AVVQAAPAWL DLDASIKKTI ALIEEAADKG AKLIAFPEVF IPGYPWHIWM
DSPAWCIGRG FVQRYFDNSL AYDSPQAEAL RAAVRKAQLT AVLGLSERDG GSLYIAQWLI
GADGETIAKR RKLRPTHAER TVYGEGDGSD LAVHERPDIG RIGALCCWEH LQPLSKYAMY
AQNEQVHVAA WPSFSLYDPF APALGAEVNN AASRVYAVEG SCFVLAPCAT VSQAMIDELC
DRPDKHALLH AGGGHAAIFG PDGSALAAQL PPDQEGLLIA EIDLGMIGIA KNAADPAGHY
SRPDVTRLLL NKKPLNRVEH FSLPVDSAAA ALPGEAAVAR PDQSI
|
|---|
| |