Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4694 |
Symbol | dapA |
ID | 5152681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4918779 |
End bp | 4919669 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640559496 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001240628 |
Protein GI | 148256043 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.111541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCCA AGACGAATTT CCGGGGCTCT TTCACCGCCT TGGTCACTCC TTTCAAAAAC GGGGCCGTCG ACGAGGCCGC GTTCCGCAGC CTGGTGAACT GGCAGATCGA CGAGGGCACC AACGGCCTGG TGCCGGTCGG CACCACGGGC GAGAGCCCGA CACTCAGCCA TGACGAGCAC AAGCAGGTGG TCGAGTGGTG CATCGCCGAG GCCAAGGGCC GCGTGCCGGT GATCGCGGGG GCCGGATCGA ACTCGACCAG GGAAGCCGTC GAACTCGCGG AGCACGCCGA GAAGGCCGGC GCCGACGCGG TGCTGGTGGT GACGCCCTAT TACAACAAGC CGACGCAGGA AGGCCTGTAT CAGCACTTCA AGGCGATCAA CGACGCAATC GGCATTCCGA TCATCATCTA CAACATTCCG CCGCGCTCGG TGATCGACAT GTCGGTCGAC ACCATGAAGC GGCTGTTCGA GCTGAAGAAC ATCGCCGGCG TGAAGGACGC CACGGCCAGC ATGGTGCGGG TGTCGCAGCA GCGCGCGACG CTGGGCGAGG ATTTCAACCA GCTGTCGGGC GAGGACGCCA CCATCATCGG CTACATGGCC CATGGCGGCC ATGGCTGCAT CTCGGTGACC TCGAACGTCG CGCCGCGGCT GTGCGCGGAA TTCCATGCCG CCTGGCAGAA GGGCGATGTC GCCACCGCGC TGAAGATCCA CGACAAGCTG ATGCCGCTGC ACACCAACCT GTTCATCGAG TCCAATCCGG GTCCGGTGAA ATACGCGCTG TCGCTGCTCG GCAAGCTGGA GGAGCGGCTG CGTTTGCCGA TGGTGCCGGT CTCCGAGCCG ACGCGGATCG CCGTACGCGA GGCCATGGTC CATGCCGGGC TGATCAACTG A
|
Protein sequence | MAAKTNFRGS FTALVTPFKN GAVDEAAFRS LVNWQIDEGT NGLVPVGTTG ESPTLSHDEH KQVVEWCIAE AKGRVPVIAG AGSNSTREAV ELAEHAEKAG ADAVLVVTPY YNKPTQEGLY QHFKAINDAI GIPIIIYNIP PRSVIDMSVD TMKRLFELKN IAGVKDATAS MVRVSQQRAT LGEDFNQLSG EDATIIGYMA HGGHGCISVT SNVAPRLCAE FHAAWQKGDV ATALKIHDKL MPLHTNLFIE SNPGPVKYAL SLLGKLEERL RLPMVPVSEP TRIAVREAMV HAGLIN
|
| |