Gene BBta_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4688 
Symbol 
ID5152073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4914973 
End bp4915365 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID640559490 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001240622 
Protein GI148256037 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.195619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCG TCACCGTTGA AGATTGTATT GATAAAGTGG ACAATCGGTT CGACCTGGTC 
CTCCTGGCCG CGCATCGCGC CCGTATGATC TCGTCGGGCT CACAACTTAC AATTGACAGA
GATAACGACA AGAATCCCGT TGTGGCACTC CGGGAGATTG CGGATTCTAC CATTTCTCCC
GAAGACTTGA AGGAAGAGCT GGTGCATTCG CTGCAGAAGT TTGTCGAAGT CGATGAGCCG
GAGCCCGATA CGGTGCCGCT GATCGGTTCG GCCGGCGCCA GCGTCGATGC CGACGACACC
GAGGTCGCGG TCGAGCGGAT GACCGAGGAA GAGCTCCTCA AGGGGCTCGA GGGCCTCGCC
CCGCCGGAAG AGCAGCCGGA AGAGGACGAG TGA
 
Protein sequence
MARVTVEDCI DKVDNRFDLV LLAAHRARMI SSGSQLTIDR DNDKNPVVAL REIADSTISP 
EDLKEELVHS LQKFVEVDEP EPDTVPLIGS AGASVDADDT EVAVERMTEE ELLKGLEGLA
PPEEQPEEDE