Gene BBta_4684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4684 
SymbollepB 
ID5151984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4910197 
End bp4910958 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content61% 
IMG OID640559486 
ProductSignal peptidase I 
Protein accessionYP_001240618 
Protein GI148256033 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.205257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.726789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA CCTCCGGAAC CAAGACTGAG AGCGGCGTCG GCGAAACCGT TCGCGTCGTC 
GTTCATGCGC TCCTGATCGC GCTCGTGATC CGCACCTTCC TGTTCCAGCC CTTCAACATC
CCGTCGGGAT CGATGAAGGC GACGCTGCTG GTCGGCGATT ATCTGTTCGT GTCGAAATAT
TCCTACGGCT ACAGCCACTA CTCGATCCCG CTGTCGCCGC CGCTGTTTTC CGGCCGCATC
TTCGGCTCCG AGCCGAGCCG GGGCGATATC GTCGTGTTCC GTCTGCCGAA GGACGACACC
ACCGACTACA TCAAGCGCGT GATCGGCTTG CCGGGCGATC GGATCCAGGT CCGCGAGGGC
CTGCTCTACA TCAACGACAA GCCGGTGCAG CGCGAGCGTC TCAGCGATTT CGTCGGAGAG
GATCCGTGCG GGCAGCCGGA CTCCACGGCG CGGGTGAAAC GCTGGAAGGA AACCCTGCCG
AACGGCGTGA GCTACGAGAC GCTGGATTGC GTCGACAATG GCTATGTCGA CAACACCAAT
GTCTACACCG TGCCGCCCGG CCACTTCTTC ATGATGGGCG ACAACCGCGA TAACTCGACC
GATAGCCGCT TCTTGTCCCA GGTGGGCTAT GTGCCGTTCG AGAACATTGT CGGCCGCGCC
CAGCTGATCT TTTTCTCCAT CGCCGAAGGC GAGCATGCCT GGGCCTTCTG GCGTTGGCCG
GTGTCGGTGC GTTGGAACCG TATTTTCAAA ATTGTGCGAT GA
 
Protein sequence
MSVTSGTKTE SGVGETVRVV VHALLIALVI RTFLFQPFNI PSGSMKATLL VGDYLFVSKY 
SYGYSHYSIP LSPPLFSGRI FGSEPSRGDI VVFRLPKDDT TDYIKRVIGL PGDRIQVREG
LLYINDKPVQ RERLSDFVGE DPCGQPDSTA RVKRWKETLP NGVSYETLDC VDNGYVDNTN
VYTVPPGHFF MMGDNRDNST DSRFLSQVGY VPFENIVGRA QLIFFSIAEG EHAWAFWRWP
VSVRWNRIFK IVR