Gene BBta_4670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4670 
Symbol 
ID5152178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4895405 
End bp4896616 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content63% 
IMG OID640559472 
Productputative ABC transporter, substrate-binding protein 
Protein accessionYP_001240604 
Protein GI148256019 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGC AGCTGCTCGC CTGCGCGTTT CTGGCCACAA CATCATTCCT TGCGACCAAC 
GCATCGGCCC AGGTCTCCGA CGACGTGGTG CGGATCGGCG TGCTGACGGA CCTTTCGAGC
TGGGGACGCG ACAACAGCGG CCCGGGTTCG GTCGAAGCCG CGAAGATGGC CGTGGAGGAG
TTCGGTCCCA CCGTGCTCGG CAAGCCGATC GAGATCATCA GCGCCGACCA CCAGATGAAG
ACCGACGTCG GCACCACGAT CGTCCGCGAC TGGTTCGACA ACGGCAAGGT CGATGCGGTC
GTCGATATCC CCAATTCCGG TATCGCGATC GCCGTGCACA ACATGGTGCG CGAGCGCAAC
AAGATCGCGC TGCTGTCCGG CCCCGGCGCA AGCTCGCTGA CCGATGAGCT GTGCAGCCCG
AACACCGTGC ATTTCACCTA CGACACCTAT GCGCTGTCCA AGGTGACGAC CTCCGCTGTG
ATCAGCCAGG GCGGCAAGTC CTGGTACTTC ATCACCGCGG ACTACGCCTT CGGCCAGCAG
CTCGAAAAGG ACGCCACGCG CTTCATCAAG GAGCTCGGCG GCACCATCCT CGGCGGCGTC
AAGCATCCGA CCAACACCGC CGACTTCTCC TCCTTTGCGC TGCAGGCGCA GAGCTCGAAG
GCGGATGTCG TCGCCTTCGC CAATGCCGGC CAGGACACCG ACAATGCCAT CAAGCAGTCC
GGTGAGTTCG GCCTGGTCAA GGGCGGCCAG AAGCTGGTCG GCCTCCTGAT GTTCGACACC
GACGTACATG CGATCGGCCT CGAGGCAGCC CAAGGCACCT ACATGACGAC GGCGTCATAC
TGGAACATGG ACGACAACAC CCGCGCCTGG TCGAAGAGGT TCTTCGTCCG CACCAAGGTG
ATGCCGACCA TGATTCAGAC CGGCGTCTAC GGATCCGTGC TGCATTATCT CAAGGCGATC
AAGGCGGCCG GCACCGATGA TCCCAAGGCT GTCATGGCCA AGATGCGCGA GCTGCCGATC
GAGGATGTTT TCGTCCACGG CGGCAAGCTG CGCGAGGATG GCCGCGTCGT CCGCGACATG
TATCTCGCGC GCGTCAAGAA GCCGTCGGAA TCCAAGGAGC CGTGGGACTA TCTGGAGATC
GTCAAGACCG TGAAGGGCGA GGATGCATTC CGCCCGGTCT CCGAATCCAA GTGCCCGCTG
TTGAAGAAAT AG
 
Protein sequence
MRRQLLACAF LATTSFLATN ASAQVSDDVV RIGVLTDLSS WGRDNSGPGS VEAAKMAVEE 
FGPTVLGKPI EIISADHQMK TDVGTTIVRD WFDNGKVDAV VDIPNSGIAI AVHNMVRERN
KIALLSGPGA SSLTDELCSP NTVHFTYDTY ALSKVTTSAV ISQGGKSWYF ITADYAFGQQ
LEKDATRFIK ELGGTILGGV KHPTNTADFS SFALQAQSSK ADVVAFANAG QDTDNAIKQS
GEFGLVKGGQ KLVGLLMFDT DVHAIGLEAA QGTYMTTASY WNMDDNTRAW SKRFFVRTKV
MPTMIQTGVY GSVLHYLKAI KAAGTDDPKA VMAKMRELPI EDVFVHGGKL REDGRVVRDM
YLARVKKPSE SKEPWDYLEI VKTVKGEDAF RPVSESKCPL LKK