Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4649 |
Symbol | glyA |
ID | 5151570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4874285 |
End bp | 4875589 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559451 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001240583 |
Protein GI | 148255998 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.863224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.229311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTT CCAGCGCCAA GCCCGCCTCG TCAGTCGATT CCTTCTTCTC CGCCACTTTG GCCGAGGCCG ATCCCGAGAT CGCCGCCGCC ATCAAGGGTG AACTCGGTCG GCAACGGCAC GAAATCGAGC TGATCGCCTC GGAAAACATC GTCAGCCGGG CGGTCCTTGA GGCCCAGGGC TCGGTGATGA CCAACAAATA CGCCGAAGGG TATCCGGGCG CGCGCTATTA TGGCGGTTGC GAATGGGTCG ACGTCGCCGA GAACCTCGCG ATCGACCGCG CCAAGAAGCT GTTCGGGGCC AATTTCGCCA ACGTCCAGCC GAATTCCGGC AGCCAGATGA ATCAGGCCGT GTTCCTGGCG CTGCTGCAGC CTGGCGACAC CTTCATGGGC CTCGACCTCG CCGCCGGCGG CCATCTGACC CACGGCTCGC CGGTCAACAT GTCCGGCAAG TGGTTCAAGG CCGCGCATTA CACCGTTCGT CGCGACGACC ATCTGATCGA CATGGATGCG GTGGCGAAGC AGGCCGAGGA GGTCAAGCCG AAGCTGATCA TCGCCGGCGG CAGCGCCTAT TCGCGCCCGT GGGACTTCAA GCGCTTCCGC GAGATCGCCG ACCACGTCGG CGCCTATCTG CTGGTCGACA TGGCGCATTT CGCCGGCCTG GTCGCCGGCG GCGCGCATGC CTCGCCGGTG CCGCATGCTC ACATCGTCAC CACCACCACC CACAAATCCC TGCGCGGCCC GCGCGGCGGC CTGATCCTGT GGAACGACGA GCAGTTCACC AAGAAGCTGA ACTCGGCGAT CTTCCCGGGC CTGCAGGGCG GCCCGCTGAT GCATGTCATC GCCGCCAAGG CGGTGGCGTT TGCCGAGGCG CTGCGGCCCG AGTTCAAGAC TTACGCGAAG AACATCGTCG AGAATGCGAA GGCGCTGGCG GAATCGCTGC GCGCGCAGGG CTTCGACATC GTCTCCGGCG GCACCGACAA TCATTTGATG CTGGTCGATC TCCGGCCGAA GGGGCTGAAG GGCAACGTCT CCGAGAAGGC GCTGGTCCGC GCCGGCATCA CCTGCAACAA GAACGGCATC CCGTTCGACC CCGAGAAGCC GTTCGTCACC TCGGGCCTGC GGCTCGGCAC CCCCGCCGCG ACCACCCGCG GCTTCGGCGT CGCCGAGTTC CAGCAGGTCG GCAGCCTGAT CGCCGAGGTT CTGAATGCGA TCGCGCAGGC GCCGGACGGC AGCGCGCCGC TGGTGGAAGC CGCGGTCAAG GCCAAGGTGA AGGCGCTGAC CGACCGGTTC CCGATCTATC AGTAA
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Protein sequence | MTASSAKPAS SVDSFFSATL AEADPEIAAA IKGELGRQRH EIELIASENI VSRAVLEAQG SVMTNKYAEG YPGARYYGGC EWVDVAENLA IDRAKKLFGA NFANVQPNSG SQMNQAVFLA LLQPGDTFMG LDLAAGGHLT HGSPVNMSGK WFKAAHYTVR RDDHLIDMDA VAKQAEEVKP KLIIAGGSAY SRPWDFKRFR EIADHVGAYL LVDMAHFAGL VAGGAHASPV PHAHIVTTTT HKSLRGPRGG LILWNDEQFT KKLNSAIFPG LQGGPLMHVI AAKAVAFAEA LRPEFKTYAK NIVENAKALA ESLRAQGFDI VSGGTDNHLM LVDLRPKGLK GNVSEKALVR AGITCNKNGI PFDPEKPFVT SGLRLGTPAA TTRGFGVAEF QQVGSLIAEV LNAIAQAPDG SAPLVEAAVK AKVKALTDRF PIYQ
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