Gene BBta_4649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4649 
SymbolglyA 
ID5151570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4874285 
End bp4875589 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content66% 
IMG OID640559451 
Productserine hydroxymethyltransferase 
Protein accessionYP_001240583 
Protein GI148255998 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.863224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.229311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT CCAGCGCCAA GCCCGCCTCG TCAGTCGATT CCTTCTTCTC CGCCACTTTG 
GCCGAGGCCG ATCCCGAGAT CGCCGCCGCC ATCAAGGGTG AACTCGGTCG GCAACGGCAC
GAAATCGAGC TGATCGCCTC GGAAAACATC GTCAGCCGGG CGGTCCTTGA GGCCCAGGGC
TCGGTGATGA CCAACAAATA CGCCGAAGGG TATCCGGGCG CGCGCTATTA TGGCGGTTGC
GAATGGGTCG ACGTCGCCGA GAACCTCGCG ATCGACCGCG CCAAGAAGCT GTTCGGGGCC
AATTTCGCCA ACGTCCAGCC GAATTCCGGC AGCCAGATGA ATCAGGCCGT GTTCCTGGCG
CTGCTGCAGC CTGGCGACAC CTTCATGGGC CTCGACCTCG CCGCCGGCGG CCATCTGACC
CACGGCTCGC CGGTCAACAT GTCCGGCAAG TGGTTCAAGG CCGCGCATTA CACCGTTCGT
CGCGACGACC ATCTGATCGA CATGGATGCG GTGGCGAAGC AGGCCGAGGA GGTCAAGCCG
AAGCTGATCA TCGCCGGCGG CAGCGCCTAT TCGCGCCCGT GGGACTTCAA GCGCTTCCGC
GAGATCGCCG ACCACGTCGG CGCCTATCTG CTGGTCGACA TGGCGCATTT CGCCGGCCTG
GTCGCCGGCG GCGCGCATGC CTCGCCGGTG CCGCATGCTC ACATCGTCAC CACCACCACC
CACAAATCCC TGCGCGGCCC GCGCGGCGGC CTGATCCTGT GGAACGACGA GCAGTTCACC
AAGAAGCTGA ACTCGGCGAT CTTCCCGGGC CTGCAGGGCG GCCCGCTGAT GCATGTCATC
GCCGCCAAGG CGGTGGCGTT TGCCGAGGCG CTGCGGCCCG AGTTCAAGAC TTACGCGAAG
AACATCGTCG AGAATGCGAA GGCGCTGGCG GAATCGCTGC GCGCGCAGGG CTTCGACATC
GTCTCCGGCG GCACCGACAA TCATTTGATG CTGGTCGATC TCCGGCCGAA GGGGCTGAAG
GGCAACGTCT CCGAGAAGGC GCTGGTCCGC GCCGGCATCA CCTGCAACAA GAACGGCATC
CCGTTCGACC CCGAGAAGCC GTTCGTCACC TCGGGCCTGC GGCTCGGCAC CCCCGCCGCG
ACCACCCGCG GCTTCGGCGT CGCCGAGTTC CAGCAGGTCG GCAGCCTGAT CGCCGAGGTT
CTGAATGCGA TCGCGCAGGC GCCGGACGGC AGCGCGCCGC TGGTGGAAGC CGCGGTCAAG
GCCAAGGTGA AGGCGCTGAC CGACCGGTTC CCGATCTATC AGTAA
 
Protein sequence
MTASSAKPAS SVDSFFSATL AEADPEIAAA IKGELGRQRH EIELIASENI VSRAVLEAQG 
SVMTNKYAEG YPGARYYGGC EWVDVAENLA IDRAKKLFGA NFANVQPNSG SQMNQAVFLA
LLQPGDTFMG LDLAAGGHLT HGSPVNMSGK WFKAAHYTVR RDDHLIDMDA VAKQAEEVKP
KLIIAGGSAY SRPWDFKRFR EIADHVGAYL LVDMAHFAGL VAGGAHASPV PHAHIVTTTT
HKSLRGPRGG LILWNDEQFT KKLNSAIFPG LQGGPLMHVI AAKAVAFAEA LRPEFKTYAK
NIVENAKALA ESLRAQGFDI VSGGTDNHLM LVDLRPKGLK GNVSEKALVR AGITCNKNGI
PFDPEKPFVT SGLRLGTPAA TTRGFGVAEF QQVGSLIAEV LNAIAQAPDG SAPLVEAAVK
AKVKALTDRF PIYQ