Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4630 |
Symbol | ihfA |
ID | 5150564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4856247 |
End bp | 4856606 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640559432 |
Product | integration host factor subunit alpha |
Protein accession | YP_001240564 |
Protein GI | 148255979 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00633863 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0311538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAA CCGGAAAAAC AGTCACACGC GTTGATCTCT GCGAGGCAGT CTACCAGAAG GTGGGTCTGT CGCGGACGGA GTCGTCCGCC TTCGTCGAGC TCGTCTTGAA GGAGATCACC GACTGCCTCG AGCGTGGCGA GACGGTGAAG CTGTCGTCGT TCGGCTCCTT CATGGTGCGC AAAAAGGGGC AGCGGATCGG GCGCAACCCG AAGACCGGCA CGGAAGTGCC GATCTCGCCG CGCCGTGTCA TGGTGTTCAA ACCTTCGGCA ATCCTCAAGC AGCGCATCAA CGGCCAGCAG GGCTCCGGCA AGATGAACGG CGAGGCCAGC CACGAGCAGC TGAGCGCCGA GCCCGAGTAG
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Protein sequence | MTGTGKTVTR VDLCEAVYQK VGLSRTESSA FVELVLKEIT DCLERGETVK LSSFGSFMVR KKGQRIGRNP KTGTEVPISP RRVMVFKPSA ILKQRINGQQ GSGKMNGEAS HEQLSAEPE
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