Gene BBta_4623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4623 
Symbol 
ID5150892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4846275 
End bp4846958 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID640559424 
Productputative isochorismatase family protein 
Protein accessionYP_001240557 
Protein GI148255972 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0276016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC GCACCATCCG CTCCGAGCCC TATGCCTGGC CCTACAACGG CGACCTCCGC 
CCTGAAAACA CCGCGCTGAT CGTGATCGAC ATGCAGACCG ATTTCTGCGG TGTCGGCGGC
TATGTCGACA AGATGGGCTA TGACCTGTCG CTCACGCGGG CGCCGATCGA ACCGATCAAG
AAGCTACTCA CGGTGATGCG CGCGCAAAAC TTCCTGATCA TCCACACCCG CGAGGGCCAT
CGCACCGATC TCTCCGACCT GCCCGCCAAC AAGCGCTGGC GTTCGCAGCA GATCGGCGCC
GGCATCGGGG ATCCCGGCCC GTGCGGCCGC ATCCTGGTGC GCGGCGAGCC GGGCTGGGAG
ATCATCCCGG AGCTCGCGCC CCTGCCCGGC GAGATCGTGA TCGACAAGCC CGGCAAGGGC
TCGTTCTGTG CCACCGATCT TGAGCTGATC CTGCGCCTCA AGGGCATCCA GAACATCGTG
CTCACCGGCA TCACCACCGA TGTCTGCGTC CACACCACGA TGCGCGAGGC CAACGATCGC
GGCTTCGAAT GCGTGCTGCT GTCCGACTGC TGCGGCGCCA CCGACAAGGG CAATCACGAC
CACGCGCTGA AGATGATCAA GATGCAGGGC GGCGTGTTCG GCGCGGTCGC GACCTCCTCC
GCTGTCATCG AGGCGCTGTC GTGA
 
Protein sequence
MTARTIRSEP YAWPYNGDLR PENTALIVID MQTDFCGVGG YVDKMGYDLS LTRAPIEPIK 
KLLTVMRAQN FLIIHTREGH RTDLSDLPAN KRWRSQQIGA GIGDPGPCGR ILVRGEPGWE
IIPELAPLPG EIVIDKPGKG SFCATDLELI LRLKGIQNIV LTGITTDVCV HTTMREANDR
GFECVLLSDC CGATDKGNHD HALKMIKMQG GVFGAVATSS AVIEALS