Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4623 |
Symbol | |
ID | 5150892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4846275 |
End bp | 4846958 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640559424 |
Product | putative isochorismatase family protein |
Protein accession | YP_001240557 |
Protein GI | 148255972 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0276016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC GCACCATCCG CTCCGAGCCC TATGCCTGGC CCTACAACGG CGACCTCCGC CCTGAAAACA CCGCGCTGAT CGTGATCGAC ATGCAGACCG ATTTCTGCGG TGTCGGCGGC TATGTCGACA AGATGGGCTA TGACCTGTCG CTCACGCGGG CGCCGATCGA ACCGATCAAG AAGCTACTCA CGGTGATGCG CGCGCAAAAC TTCCTGATCA TCCACACCCG CGAGGGCCAT CGCACCGATC TCTCCGACCT GCCCGCCAAC AAGCGCTGGC GTTCGCAGCA GATCGGCGCC GGCATCGGGG ATCCCGGCCC GTGCGGCCGC ATCCTGGTGC GCGGCGAGCC GGGCTGGGAG ATCATCCCGG AGCTCGCGCC CCTGCCCGGC GAGATCGTGA TCGACAAGCC CGGCAAGGGC TCGTTCTGTG CCACCGATCT TGAGCTGATC CTGCGCCTCA AGGGCATCCA GAACATCGTG CTCACCGGCA TCACCACCGA TGTCTGCGTC CACACCACGA TGCGCGAGGC CAACGATCGC GGCTTCGAAT GCGTGCTGCT GTCCGACTGC TGCGGCGCCA CCGACAAGGG CAATCACGAC CACGCGCTGA AGATGATCAA GATGCAGGGC GGCGTGTTCG GCGCGGTCGC GACCTCCTCC GCTGTCATCG AGGCGCTGTC GTGA
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Protein sequence | MTARTIRSEP YAWPYNGDLR PENTALIVID MQTDFCGVGG YVDKMGYDLS LTRAPIEPIK KLLTVMRAQN FLIIHTREGH RTDLSDLPAN KRWRSQQIGA GIGDPGPCGR ILVRGEPGWE IIPELAPLPG EIVIDKPGKG SFCATDLELI LRLKGIQNIV LTGITTDVCV HTTMREANDR GFECVLLSDC CGATDKGNHD HALKMIKMQG GVFGAVATSS AVIEALS
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